Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC14.13□□□□□ -0.15
CHKB-CPT1BH3BT56 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CHKB-CPT1BH3BT56 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC14.13□□□□□ -0.15
CHKB-CPT1BH3BT56 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHKB-CPT1BH3BT56 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHKB-CPT1BH3BT56 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CHKB-CPT1BH3BT56 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHKB-CPT1BH3BT56 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHKB-CPT1BH3BT56 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHKB-CPT1BH3BT56 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHKB-CPT1BH3BT56 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CHKB-CPT1BH3BT56 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHKB-CPT1BH3BT56 AL121749.1-202ENST00000609313 2153 ntBASIC14.12□□□□□ -0.15
CHKB-CPT1BH3BT56 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHKB-CPT1BH3BT56 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHKB-CPT1BH3BT56 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHKB-CPT1BH3BT56 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CHKB-CPT1BH3BT56 HCG11-201ENST00000411553 5696 ntBASIC14.12□□□□□ -0.15
CHKB-CPT1BH3BT56 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHKB-CPT1BH3BT56 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CHKB-CPT1BH3BT56 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHKB-CPT1BH3BT56 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CHKB-CPT1BH3BT56 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CHKB-CPT1BH3BT56 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CHKB-CPT1BH3BT56 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CHKB-CPT1BH3BT56 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHKB-CPT1BH3BT56 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHKB-CPT1BH3BT56 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHKB-CPT1BH3BT56 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHKB-CPT1BH3BT56 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHKB-CPT1BH3BT56 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CHKB-CPT1BH3BT56 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHKB-CPT1BH3BT56 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHKB-CPT1BH3BT56 RARA-203ENST00000394086 2008 ntTSL 2 BASIC14.09□□□□□ -0.15
CHKB-CPT1BH3BT56 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CHKB-CPT1BH3BT56 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CHKB-CPT1BH3BT56 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CHKB-CPT1BH3BT56 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHKB-CPT1BH3BT56 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CHKB-CPT1BH3BT56 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CHKB-CPT1BH3BT56 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CHKB-CPT1BH3BT56 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CHKB-CPT1BH3BT56 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.08□□□□□ -0.16
CHKB-CPT1BH3BT56 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CHKB-CPT1BH3BT56 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CHKB-CPT1BH3BT56 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CHKB-CPT1BH3BT56 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CHKB-CPT1BH3BT56 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CHKB-CPT1BH3BT56 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CHKB-CPT1BH3BT56 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CHKB-CPT1BH3BT56 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHKB-CPT1BH3BT56 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CHKB-CPT1BH3BT56 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHKB-CPT1BH3BT56 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CHKB-CPT1BH3BT56 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CHKB-CPT1BH3BT56 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
CHKB-CPT1BH3BT56 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHKB-CPT1BH3BT56 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHKB-CPT1BH3BT56 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHKB-CPT1BH3BT56 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHKB-CPT1BH3BT56 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHKB-CPT1BH3BT56 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHKB-CPT1BH3BT56 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CHKB-CPT1BH3BT56 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHKB-CPT1BH3BT56 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHKB-CPT1BH3BT56 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHKB-CPT1BH3BT56 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHKB-CPT1BH3BT56 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHKB-CPT1BH3BT56 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHKB-CPT1BH3BT56 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHKB-CPT1BH3BT56 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC14.04□□□□□ -0.16
CHKB-CPT1BH3BT56 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHKB-CPT1BH3BT56 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CHKB-CPT1BH3BT56 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CHKB-CPT1BH3BT56 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHKB-CPT1BH3BT56 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC14.03□□□□□ -0.16
CHKB-CPT1BH3BT56 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHKB-CPT1BH3BT56 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC14.03□□□□□ -0.16
CHKB-CPT1BH3BT56 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC14.03□□□□□ -0.16
CHKB-CPT1BH3BT56 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHKB-CPT1BH3BT56 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHKB-CPT1BH3BT56 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CHKB-CPT1BH3BT56 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC14.02□□□□□ -0.16
CHKB-CPT1BH3BT56 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC14.02□□□□□ -0.16
CHKB-CPT1BH3BT56 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CHKB-CPT1BH3BT56 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHKB-CPT1BH3BT56 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CHKB-CPT1BH3BT56 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHKB-CPT1BH3BT56 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHKB-CPT1BH3BT56 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHKB-CPT1BH3BT56 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
CHKB-CPT1BH3BT56 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHKB-CPT1BH3BT56 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC14.01□□□□□ -0.17
CHKB-CPT1BH3BT56 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHKB-CPT1BH3BT56 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
CHKB-CPT1BH3BT56 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHKB-CPT1BH3BT56 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHKB-CPT1BH3BT56 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHKB-CPT1BH3BT56 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CHKB-CPT1BH3BT56 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms