Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV6-7A0A0A0MS04 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRBV6-7A0A0A0MS04 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRBV6-7A0A0A0MS04 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRBV6-7A0A0A0MS04 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.87■□□□□ 0.93
TRBV6-7A0A0A0MS04 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.87■□□□□ 0.93
TRBV6-7A0A0A0MS04 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TRBV6-7A0A0A0MS04 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRBV6-7A0A0A0MS04 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRBV6-7A0A0A0MS04 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRBV6-7A0A0A0MS04 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.86■□□□□ 0.93
TRBV6-7A0A0A0MS04 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
TRBV6-7A0A0A0MS04 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRBV6-7A0A0A0MS04 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRBV6-7A0A0A0MS04 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.85■□□□□ 0.93
TRBV6-7A0A0A0MS04 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRBV6-7A0A0A0MS04 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRBV6-7A0A0A0MS04 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.84■□□□□ 0.93
TRBV6-7A0A0A0MS04 MIR3665-201ENST00000578708 105 ntBASIC20.84■□□□□ 0.93
TRBV6-7A0A0A0MS04 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
TRBV6-7A0A0A0MS04 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TRBV6-7A0A0A0MS04 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRBV6-7A0A0A0MS04 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.83■□□□□ 0.93
TRBV6-7A0A0A0MS04 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
TRBV6-7A0A0A0MS04 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
TRBV6-7A0A0A0MS04 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRBV6-7A0A0A0MS04 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRBV6-7A0A0A0MS04 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRBV6-7A0A0A0MS04 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
TRBV6-7A0A0A0MS04 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.82■□□□□ 0.92
TRBV6-7A0A0A0MS04 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.82■□□□□ 0.92
TRBV6-7A0A0A0MS04 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.81■□□□□ 0.92
TRBV6-7A0A0A0MS04 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TRBV6-7A0A0A0MS04 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRBV6-7A0A0A0MS04 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRBV6-7A0A0A0MS04 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRBV6-7A0A0A0MS04 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRBV6-7A0A0A0MS04 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRBV6-7A0A0A0MS04 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
TRBV6-7A0A0A0MS04 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.8■□□□□ 0.92
TRBV6-7A0A0A0MS04 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.79■□□□□ 0.92
TRBV6-7A0A0A0MS04 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TRBV6-7A0A0A0MS04 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.79■□□□□ 0.92
TRBV6-7A0A0A0MS04 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRBV6-7A0A0A0MS04 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRBV6-7A0A0A0MS04 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.78■□□□□ 0.92
TRBV6-7A0A0A0MS04 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRBV6-7A0A0A0MS04 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.78■□□□□ 0.92
TRBV6-7A0A0A0MS04 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.78■□□□□ 0.92
TRBV6-7A0A0A0MS04 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRBV6-7A0A0A0MS04 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV6-7A0A0A0MS04 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV6-7A0A0A0MS04 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.77■□□□□ 0.92
TRBV6-7A0A0A0MS04 AP006261.1-201ENST00000584783 668 ntBASIC20.77■□□□□ 0.92
TRBV6-7A0A0A0MS04 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.77■□□□□ 0.92
TRBV6-7A0A0A0MS04 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV6-7A0A0A0MS04 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV6-7A0A0A0MS04 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.77■□□□□ 0.92
TRBV6-7A0A0A0MS04 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV6-7A0A0A0MS04 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV6-7A0A0A0MS04 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.77■□□□□ 0.91
TRBV6-7A0A0A0MS04 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRBV6-7A0A0A0MS04 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TRBV6-7A0A0A0MS04 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRBV6-7A0A0A0MS04 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.76■□□□□ 0.91
TRBV6-7A0A0A0MS04 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
TRBV6-7A0A0A0MS04 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRBV6-7A0A0A0MS04 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.75■□□□□ 0.91
TRBV6-7A0A0A0MS04 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.75■□□□□ 0.91
TRBV6-7A0A0A0MS04 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
TRBV6-7A0A0A0MS04 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRBV6-7A0A0A0MS04 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRBV6-7A0A0A0MS04 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TRBV6-7A0A0A0MS04 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV6-7A0A0A0MS04 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV6-7A0A0A0MS04 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV6-7A0A0A0MS04 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.74■□□□□ 0.91
TRBV6-7A0A0A0MS04 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TRBV6-7A0A0A0MS04 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV6-7A0A0A0MS04 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV6-7A0A0A0MS04 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.73■□□□□ 0.91
TRBV6-7A0A0A0MS04 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRBV6-7A0A0A0MS04 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRBV6-7A0A0A0MS04 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRBV6-7A0A0A0MS04 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.73■□□□□ 0.91
TRBV6-7A0A0A0MS04 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
TRBV6-7A0A0A0MS04 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV6-7A0A0A0MS04 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV6-7A0A0A0MS04 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.72■□□□□ 0.91
TRBV6-7A0A0A0MS04 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
TRBV6-7A0A0A0MS04 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV6-7A0A0A0MS04 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV6-7A0A0A0MS04 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV6-7A0A0A0MS04 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV6-7A0A0A0MS04 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.71■□□□□ 0.91
TRBV6-7A0A0A0MS04 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV6-7A0A0A0MS04 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
TRBV6-7A0A0A0MS04 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV6-7A0A0A0MS04 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.7■□□□□ 0.9
TRBV6-7A0A0A0MS04 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms