Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 AC005332.7-201ENST00000614046 2005 ntBASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 AC093484.2-201ENST00000580996 2166 ntBASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 HEIH-201ENST00000623091 1652 ntBASIC18.03■□□□□ 0.48
CSNK1G3Q9Y6M4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.02■□□□□ 0.48
CSNK1G3Q9Y6M4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.02■□□□□ 0.48
CSNK1G3Q9Y6M4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CSNK1G3Q9Y6M4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CSNK1G3Q9Y6M4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CSNK1G3Q9Y6M4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.02■□□□□ 0.48
CSNK1G3Q9Y6M4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CSNK1G3Q9Y6M4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CSNK1G3Q9Y6M4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
CSNK1G3Q9Y6M4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CSNK1G3Q9Y6M4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CSNK1G3Q9Y6M4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CSNK1G3Q9Y6M4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CSNK1G3Q9Y6M4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CSNK1G3Q9Y6M4 AC104819.1-201ENST00000504587 486 ntBASIC18.02■□□□□ 0.48
CSNK1G3Q9Y6M4 GUSBP12-201ENST00000513727 720 ntBASIC18.02■□□□□ 0.48
CSNK1G3Q9Y6M4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CSNK1G3Q9Y6M4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.02■□□□□ 0.48
CSNK1G3Q9Y6M4 AC091304.2-201ENST00000564639 760 ntBASIC18.02■□□□□ 0.48
CSNK1G3Q9Y6M4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CSNK1G3Q9Y6M4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.02■□□□□ 0.48
CSNK1G3Q9Y6M4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.02■□□□□ 0.48
CSNK1G3Q9Y6M4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CSNK1G3Q9Y6M4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CSNK1G3Q9Y6M4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CSNK1G3Q9Y6M4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CSNK1G3Q9Y6M4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CSNK1G3Q9Y6M4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.02■□□□□ 0.47
CSNK1G3Q9Y6M4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.02■□□□□ 0.47
CSNK1G3Q9Y6M4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.02■□□□□ 0.47
CSNK1G3Q9Y6M4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CSNK1G3Q9Y6M4 BX323043.1-201ENST00000641006 1765 ntBASIC18.02■□□□□ 0.47
CSNK1G3Q9Y6M4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 Z69720.1-201ENST00000601483 472 ntBASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 IFNL4P1-201ENST00000607083 540 ntBASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CSNK1G3Q9Y6M4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CSNK1G3Q9Y6M4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18■□□□□ 0.47
CSNK1G3Q9Y6M4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CSNK1G3Q9Y6M4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CSNK1G3Q9Y6M4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18■□□□□ 0.47
CSNK1G3Q9Y6M4 AIRN-201ENST00000601203 4374 ntBASIC18■□□□□ 0.47
CSNK1G3Q9Y6M4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18■□□□□ 0.47
CSNK1G3Q9Y6M4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CSNK1G3Q9Y6M4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CSNK1G3Q9Y6M4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18■□□□□ 0.47
CSNK1G3Q9Y6M4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
CSNK1G3Q9Y6M4 AC246785.2-201ENST00000432512 513 ntBASIC18■□□□□ 0.47
CSNK1G3Q9Y6M4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18■□□□□ 0.47
CSNK1G3Q9Y6M4 FDX1P1-201ENST00000449115 551 ntBASIC18■□□□□ 0.47
CSNK1G3Q9Y6M4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18■□□□□ 0.47
CSNK1G3Q9Y6M4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18■□□□□ 0.47
CSNK1G3Q9Y6M4 AC233702.3-201ENST00000578656 1387 ntBASIC18■□□□□ 0.47
CSNK1G3Q9Y6M4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CSNK1G3Q9Y6M4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CSNK1G3Q9Y6M4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms