Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.15■□□□□ 0.82
SCN10AQ9Y5Y9 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.15■□□□□ 0.82
SCN10AQ9Y5Y9 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.15■□□□□ 0.82
SCN10AQ9Y5Y9 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.15■□□□□ 0.82
SCN10AQ9Y5Y9 IGHV3-22-201ENST00000520721 359 ntBASIC20.15■□□□□ 0.82
SCN10AQ9Y5Y9 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.15■□□□□ 0.82
SCN10AQ9Y5Y9 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.15■□□□□ 0.82
SCN10AQ9Y5Y9 AC008687.5-201ENST00000593746 558 ntBASIC20.15■□□□□ 0.82
SCN10AQ9Y5Y9 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.15■□□□□ 0.82
SCN10AQ9Y5Y9 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCN10AQ9Y5Y9 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCN10AQ9Y5Y9 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.15■□□□□ 0.82
SCN10AQ9Y5Y9 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.15■□□□□ 0.82
SCN10AQ9Y5Y9 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SCN10AQ9Y5Y9 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCN10AQ9Y5Y9 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCN10AQ9Y5Y9 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.15■□□□□ 0.82
SCN10AQ9Y5Y9 AL049840.3-201ENST00000602669 611 ntBASIC20.15■□□□□ 0.82
SCN10AQ9Y5Y9 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCN10AQ9Y5Y9 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCN10AQ9Y5Y9 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCN10AQ9Y5Y9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
SCN10AQ9Y5Y9 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SCN10AQ9Y5Y9 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SCN10AQ9Y5Y9 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SCN10AQ9Y5Y9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SCN10AQ9Y5Y9 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SCN10AQ9Y5Y9 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SCN10AQ9Y5Y9 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.14■□□□□ 0.81
SCN10AQ9Y5Y9 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SCN10AQ9Y5Y9 AC106730.1-201ENST00000566722 1090 ntBASIC20.14■□□□□ 0.81
SCN10AQ9Y5Y9 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SCN10AQ9Y5Y9 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SCN10AQ9Y5Y9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SCN10AQ9Y5Y9 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SCN10AQ9Y5Y9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.14■□□□□ 0.81
SCN10AQ9Y5Y9 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SCN10AQ9Y5Y9 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SCN10AQ9Y5Y9 AP005117.1-201ENST00000584346 1413 ntBASIC20.14■□□□□ 0.81
SCN10AQ9Y5Y9 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SCN10AQ9Y5Y9 RCN1P2-201ENST00000398357 915 ntBASIC20.14■□□□□ 0.81
SCN10AQ9Y5Y9 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.14■□□□□ 0.81
SCN10AQ9Y5Y9 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SCN10AQ9Y5Y9 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SCN10AQ9Y5Y9 AC068472.1-201ENST00000474589 881 ntBASIC20.14■□□□□ 0.81
SCN10AQ9Y5Y9 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.14■□□□□ 0.81
SCN10AQ9Y5Y9 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.14■□□□□ 0.81
SCN10AQ9Y5Y9 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.14■□□□□ 0.81
SCN10AQ9Y5Y9 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.14■□□□□ 0.81
SCN10AQ9Y5Y9 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SCN10AQ9Y5Y9 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SCN10AQ9Y5Y9 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.13■□□□□ 0.81
SCN10AQ9Y5Y9 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SCN10AQ9Y5Y9 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SCN10AQ9Y5Y9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SCN10AQ9Y5Y9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SCN10AQ9Y5Y9 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.13■□□□□ 0.81
SCN10AQ9Y5Y9 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SCN10AQ9Y5Y9 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.13■□□□□ 0.81
SCN10AQ9Y5Y9 MYLKP1-201ENST00000509077 1580 ntBASIC20.13■□□□□ 0.81
SCN10AQ9Y5Y9 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SCN10AQ9Y5Y9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.13■□□□□ 0.81
SCN10AQ9Y5Y9 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SCN10AQ9Y5Y9 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SCN10AQ9Y5Y9 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.13■□□□□ 0.81
SCN10AQ9Y5Y9 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.13■□□□□ 0.81
SCN10AQ9Y5Y9 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.13■□□□□ 0.81
SCN10AQ9Y5Y9 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SCN10AQ9Y5Y9 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SCN10AQ9Y5Y9 AP001269.4-201ENST00000609611 512 ntBASIC20.13■□□□□ 0.81
SCN10AQ9Y5Y9 AC009154.2-201ENST00000621177 724 ntBASIC20.13■□□□□ 0.81
SCN10AQ9Y5Y9 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SCN10AQ9Y5Y9 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SCN10AQ9Y5Y9 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCN10AQ9Y5Y9 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.12■□□□□ 0.81
SCN10AQ9Y5Y9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.12■□□□□ 0.81
SCN10AQ9Y5Y9 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
SCN10AQ9Y5Y9 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SCN10AQ9Y5Y9 POLD2P1-201ENST00000511220 997 ntBASIC20.12■□□□□ 0.81
SCN10AQ9Y5Y9 SART3-203ENST00000546611 1184 ntBASIC20.12■□□□□ 0.81
SCN10AQ9Y5Y9 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.12■□□□□ 0.81
SCN10AQ9Y5Y9 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SCN10AQ9Y5Y9 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.12■□□□□ 0.81
SCN10AQ9Y5Y9 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.12■□□□□ 0.81
SCN10AQ9Y5Y9 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SCN10AQ9Y5Y9 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCN10AQ9Y5Y9 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.12■□□□□ 0.81
SCN10AQ9Y5Y9 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.12■□□□□ 0.81
SCN10AQ9Y5Y9 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SCN10AQ9Y5Y9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.12■□□□□ 0.81
SCN10AQ9Y5Y9 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SCN10AQ9Y5Y9 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.12■□□□□ 0.81
SCN10AQ9Y5Y9 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCN10AQ9Y5Y9 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCN10AQ9Y5Y9 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SCN10AQ9Y5Y9 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.12■□□□□ 0.81
SCN10AQ9Y5Y9 AC073648.2-201ENST00000510116 352 ntBASIC20.12■□□□□ 0.81
SCN10AQ9Y5Y9 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.12■□□□□ 0.81
SCN10AQ9Y5Y9 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCN10AQ9Y5Y9 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms