Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 AC016769.1-201ENST00000409132 1010 ntBASIC17.44■□□□□ 0.38
AP4S1Q9Y587 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP4S1Q9Y587 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.43■□□□□ 0.38
AP4S1Q9Y587 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 AC022211.2-201ENST00000585075 2527 ntBASIC17.43■□□□□ 0.38
AP4S1Q9Y587 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AP4S1Q9Y587 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP4S1Q9Y587 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.42■□□□□ 0.38
AP4S1Q9Y587 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP4S1Q9Y587 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP4S1Q9Y587 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP4S1Q9Y587 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP4S1Q9Y587 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.42■□□□□ 0.38
AP4S1Q9Y587 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.42■□□□□ 0.38
AP4S1Q9Y587 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.42■□□□□ 0.38
AP4S1Q9Y587 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
AP4S1Q9Y587 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.42■□□□□ 0.38
AP4S1Q9Y587 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.42■□□□□ 0.38
AP4S1Q9Y587 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms