Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 AL596442.2-201ENST00000610240 980 ntBASIC17.42■□□□□ 0.38
LHX6Q9UPM6 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
LHX6Q9UPM6 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX6Q9UPM6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX6Q9UPM6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LHX6Q9UPM6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX6Q9UPM6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX6Q9UPM6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LHX6Q9UPM6 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.41■□□□□ 0.38
LHX6Q9UPM6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.41■□□□□ 0.38
LHX6Q9UPM6 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.41■□□□□ 0.38
LHX6Q9UPM6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
LHX6Q9UPM6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX6Q9UPM6 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.41■□□□□ 0.38
LHX6Q9UPM6 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.41■□□□□ 0.38
LHX6Q9UPM6 AC211486.1-202ENST00000416371 468 ntBASIC17.41■□□□□ 0.38
LHX6Q9UPM6 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.41■□□□□ 0.38
LHX6Q9UPM6 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.41■□□□□ 0.38
LHX6Q9UPM6 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.41■□□□□ 0.38
LHX6Q9UPM6 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX6Q9UPM6 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.41■□□□□ 0.38
LHX6Q9UPM6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LHX6Q9UPM6 AC211476.1-201ENST00000503899 468 ntBASIC17.41■□□□□ 0.38
LHX6Q9UPM6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX6Q9UPM6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.41■□□□□ 0.38
LHX6Q9UPM6 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.41■□□□□ 0.38
LHX6Q9UPM6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.41■□□□□ 0.38
LHX6Q9UPM6 AL591684.3-201ENST00000605187 298 ntBASIC17.41■□□□□ 0.38
LHX6Q9UPM6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.41■□□□□ 0.38
LHX6Q9UPM6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LHX6Q9UPM6 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX6Q9UPM6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX6Q9UPM6 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.41■□□□□ 0.38
LHX6Q9UPM6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX6Q9UPM6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX6Q9UPM6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LHX6Q9UPM6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.4■□□□□ 0.38
LHX6Q9UPM6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.4■□□□□ 0.38
LHX6Q9UPM6 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.4■□□□□ 0.38
LHX6Q9UPM6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
LHX6Q9UPM6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LHX6Q9UPM6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
LHX6Q9UPM6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LHX6Q9UPM6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LHX6Q9UPM6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LHX6Q9UPM6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LHX6Q9UPM6 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.4■□□□□ 0.38
LHX6Q9UPM6 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LHX6Q9UPM6 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
LHX6Q9UPM6 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
LHX6Q9UPM6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.4■□□□□ 0.38
LHX6Q9UPM6 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.4■□□□□ 0.38
LHX6Q9UPM6 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.4■□□□□ 0.38
LHX6Q9UPM6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.4■□□□□ 0.38
LHX6Q9UPM6 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.4■□□□□ 0.38
LHX6Q9UPM6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LHX6Q9UPM6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LHX6Q9UPM6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LHX6Q9UPM6 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LHX6Q9UPM6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LHX6Q9UPM6 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LHX6Q9UPM6 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
LHX6Q9UPM6 AC009237.14-201ENST00000609975 1594 ntBASIC17.4■□□□□ 0.38
LHX6Q9UPM6 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
LHX6Q9UPM6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LHX6Q9UPM6 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
LHX6Q9UPM6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.39■□□□□ 0.38
LHX6Q9UPM6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LHX6Q9UPM6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
LHX6Q9UPM6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.39■□□□□ 0.38
LHX6Q9UPM6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.38
LHX6Q9UPM6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LHX6Q9UPM6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.38
LHX6Q9UPM6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.39■□□□□ 0.37
LHX6Q9UPM6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.39■□□□□ 0.37
LHX6Q9UPM6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LHX6Q9UPM6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.39■□□□□ 0.37
LHX6Q9UPM6 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.39■□□□□ 0.37
LHX6Q9UPM6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LHX6Q9UPM6 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LHX6Q9UPM6 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LHX6Q9UPM6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LHX6Q9UPM6 AL691432.2-201ENST00000607222 2038 ntBASIC17.39■□□□□ 0.37
LHX6Q9UPM6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LHX6Q9UPM6 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LHX6Q9UPM6 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LHX6Q9UPM6 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LHX6Q9UPM6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms