Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 TCF3P1-201ENST00000423021 1937 ntBASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 AL022342.1-201ENST00000400363 863 ntBASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 AL023284.2-201ENST00000405850 579 ntBASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 NUS1P1-201ENST00000446295 882 ntBASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 KRT16P4-201ENST00000453883 522 ntBASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 PRELID1P1-202ENST00000567272 903 ntBASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 AP000867.3-201ENST00000524675 377 ntBASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NOTCH3Q9UM47 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 AL391807.1-203ENST00000604392 2365 ntBASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 TPSP2-201ENST00000561760 610 ntBASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.23□□□□□ -0.13
NOTCH3Q9UM47 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms