Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.62■□□□□ 0.73
SALL4Q9UJQ4 AL031985.4-201ENST00000642138 673 ntBASIC19.62■□□□□ 0.73
SALL4Q9UJQ4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SALL4Q9UJQ4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.62■□□□□ 0.73
SALL4Q9UJQ4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SALL4Q9UJQ4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.62■□□□□ 0.73
SALL4Q9UJQ4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SALL4Q9UJQ4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
SALL4Q9UJQ4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SALL4Q9UJQ4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SALL4Q9UJQ4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.61■□□□□ 0.73
SALL4Q9UJQ4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SALL4Q9UJQ4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SALL4Q9UJQ4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SALL4Q9UJQ4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SALL4Q9UJQ4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SALL4Q9UJQ4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SALL4Q9UJQ4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SALL4Q9UJQ4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SALL4Q9UJQ4 AC211429.1-201ENST00000415277 523 ntBASIC19.61■□□□□ 0.73
SALL4Q9UJQ4 ECEL1P3-201ENST00000427961 737 ntBASIC19.61■□□□□ 0.73
SALL4Q9UJQ4 FAM207BP-201ENST00000447172 505 ntBASIC19.61■□□□□ 0.73
SALL4Q9UJQ4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.61■□□□□ 0.73
SALL4Q9UJQ4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.61■□□□□ 0.73
SALL4Q9UJQ4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.61■□□□□ 0.73
SALL4Q9UJQ4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.61■□□□□ 0.73
SALL4Q9UJQ4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SALL4Q9UJQ4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SALL4Q9UJQ4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.61■□□□□ 0.73
SALL4Q9UJQ4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SALL4Q9UJQ4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SALL4Q9UJQ4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SALL4Q9UJQ4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 PHGDH-209ENST00000641074 1780 ntBASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 GPAT2P1-201ENST00000444924 1672 ntBASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 MIR564-202ENST00000385049 94 ntBASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 AL023284.2-201ENST00000405850 579 ntBASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 LINC01023-201ENST00000606054 436 ntBASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 MIR6786-201ENST00000616843 113 ntBASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 AC113410.3-201ENST00000623366 203 ntBASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SALL4Q9UJQ4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SALL4Q9UJQ4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SALL4Q9UJQ4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SALL4Q9UJQ4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SALL4Q9UJQ4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
SALL4Q9UJQ4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SALL4Q9UJQ4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SALL4Q9UJQ4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SALL4Q9UJQ4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SALL4Q9UJQ4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.59■□□□□ 0.73
SALL4Q9UJQ4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SALL4Q9UJQ4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SALL4Q9UJQ4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SALL4Q9UJQ4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SALL4Q9UJQ4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SALL4Q9UJQ4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.59■□□□□ 0.73
SALL4Q9UJQ4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.59■□□□□ 0.73
SALL4Q9UJQ4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
SALL4Q9UJQ4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
SALL4Q9UJQ4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.59■□□□□ 0.73
SALL4Q9UJQ4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SALL4Q9UJQ4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.59■□□□□ 0.73
SALL4Q9UJQ4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SALL4Q9UJQ4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SALL4Q9UJQ4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.59■□□□□ 0.73
SALL4Q9UJQ4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SALL4Q9UJQ4 KRT8P50-201ENST00000562022 1438 ntBASIC19.59■□□□□ 0.73
SALL4Q9UJQ4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SALL4Q9UJQ4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms