Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
NIPSNAP3AQ9UFN0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.65■□□□□ 0.42
NIPSNAP3AQ9UFN0 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NIPSNAP3AQ9UFN0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.65■□□□□ 0.42
NIPSNAP3AQ9UFN0 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NIPSNAP3AQ9UFN0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.65■□□□□ 0.42
NIPSNAP3AQ9UFN0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
NIPSNAP3AQ9UFN0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
NIPSNAP3AQ9UFN0 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
NIPSNAP3AQ9UFN0 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
NIPSNAP3AQ9UFN0 OR6D1P-203ENST00000641209 4860 ntBASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 AL355802.2-201ENST00000402069 882 ntBASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.64■□□□□ 0.41
NIPSNAP3AQ9UFN0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 RCC2P3-201ENST00000418112 1537 ntBASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 CROCCP1-201ENST00000426910 5675 ntBASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NIPSNAP3AQ9UFN0 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NIPSNAP3AQ9UFN0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NIPSNAP3AQ9UFN0 ESPNP-201ENST00000270691 2015 ntBASIC17.62■□□□□ 0.41
NIPSNAP3AQ9UFN0 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NIPSNAP3AQ9UFN0 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NIPSNAP3AQ9UFN0 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NIPSNAP3AQ9UFN0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NIPSNAP3AQ9UFN0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.62■□□□□ 0.41
NIPSNAP3AQ9UFN0 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NIPSNAP3AQ9UFN0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NIPSNAP3AQ9UFN0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NIPSNAP3AQ9UFN0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NIPSNAP3AQ9UFN0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NIPSNAP3AQ9UFN0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NIPSNAP3AQ9UFN0 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.62■□□□□ 0.41
NIPSNAP3AQ9UFN0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NIPSNAP3AQ9UFN0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NIPSNAP3AQ9UFN0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NIPSNAP3AQ9UFN0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms