Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
DKK4Q9UBT3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DKK4Q9UBT3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
DKK4Q9UBT3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DKK4Q9UBT3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DKK4Q9UBT3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
DKK4Q9UBT3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DKK4Q9UBT3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DKK4Q9UBT3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.11■□□□□ 0.33
DKK4Q9UBT3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
DKK4Q9UBT3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.11■□□□□ 0.33
DKK4Q9UBT3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.11■□□□□ 0.33
DKK4Q9UBT3 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.11■□□□□ 0.33
DKK4Q9UBT3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.11■□□□□ 0.33
DKK4Q9UBT3 COX20P2-201ENST00000452636 358 ntBASIC17.11■□□□□ 0.33
DKK4Q9UBT3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
DKK4Q9UBT3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.11■□□□□ 0.33
DKK4Q9UBT3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DKK4Q9UBT3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.11■□□□□ 0.33
DKK4Q9UBT3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.11■□□□□ 0.33
DKK4Q9UBT3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.11■□□□□ 0.33
DKK4Q9UBT3 AP002472.1-201ENST00000577490 586 ntBASIC17.11■□□□□ 0.33
DKK4Q9UBT3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DKK4Q9UBT3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DKK4Q9UBT3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.11■□□□□ 0.33
DKK4Q9UBT3 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.11■□□□□ 0.33
DKK4Q9UBT3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.11■□□□□ 0.33
DKK4Q9UBT3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DKK4Q9UBT3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.11■□□□□ 0.33
DKK4Q9UBT3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DKK4Q9UBT3 AC125634.1-201ENST00000438758 1403 ntBASIC17.11■□□□□ 0.33
DKK4Q9UBT3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.11■□□□□ 0.33
DKK4Q9UBT3 AP002414.3-201ENST00000589352 1468 ntBASIC17.11■□□□□ 0.33
DKK4Q9UBT3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DKK4Q9UBT3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DKK4Q9UBT3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DKK4Q9UBT3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.1■□□□□ 0.33
DKK4Q9UBT3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DKK4Q9UBT3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DKK4Q9UBT3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DKK4Q9UBT3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DKK4Q9UBT3 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DKK4Q9UBT3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DKK4Q9UBT3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DKK4Q9UBT3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DKK4Q9UBT3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.1■□□□□ 0.33
DKK4Q9UBT3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DKK4Q9UBT3 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
DKK4Q9UBT3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.1■□□□□ 0.33
DKK4Q9UBT3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.1■□□□□ 0.33
DKK4Q9UBT3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.1■□□□□ 0.33
DKK4Q9UBT3 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.1■□□□□ 0.33
DKK4Q9UBT3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.1■□□□□ 0.33
DKK4Q9UBT3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.1■□□□□ 0.33
DKK4Q9UBT3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.1■□□□□ 0.33
DKK4Q9UBT3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.1■□□□□ 0.33
DKK4Q9UBT3 AC064836.3-201ENST00000607928 673 ntBASIC17.1■□□□□ 0.33
DKK4Q9UBT3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.1■□□□□ 0.33
DKK4Q9UBT3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.1■□□□□ 0.33
DKK4Q9UBT3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.1■□□□□ 0.33
DKK4Q9UBT3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.1■□□□□ 0.33
DKK4Q9UBT3 AC002310.6-201ENST00000624451 1377 ntBASIC17.1■□□□□ 0.33
DKK4Q9UBT3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
DKK4Q9UBT3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DKK4Q9UBT3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DKK4Q9UBT3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DKK4Q9UBT3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
DKK4Q9UBT3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DKK4Q9UBT3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.1■□□□□ 0.33
DKK4Q9UBT3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
DKK4Q9UBT3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.09■□□□□ 0.33
DKK4Q9UBT3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.09■□□□□ 0.33
DKK4Q9UBT3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DKK4Q9UBT3 AC112907.3-201ENST00000577781 2400 ntBASIC17.09■□□□□ 0.33
DKK4Q9UBT3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DKK4Q9UBT3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DKK4Q9UBT3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DKK4Q9UBT3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DKK4Q9UBT3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
DKK4Q9UBT3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DKK4Q9UBT3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.09■□□□□ 0.33
DKK4Q9UBT3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.09■□□□□ 0.33
DKK4Q9UBT3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DKK4Q9UBT3 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.09■□□□□ 0.33
DKK4Q9UBT3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.09■□□□□ 0.33
DKK4Q9UBT3 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.09■□□□□ 0.33
DKK4Q9UBT3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DKK4Q9UBT3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DKK4Q9UBT3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.09■□□□□ 0.33
DKK4Q9UBT3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
DKK4Q9UBT3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DKK4Q9UBT3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
DKK4Q9UBT3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DKK4Q9UBT3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
DKK4Q9UBT3 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.08■□□□□ 0.33
DKK4Q9UBT3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.08■□□□□ 0.33
DKK4Q9UBT3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
DKK4Q9UBT3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
DKK4Q9UBT3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DKK4Q9UBT3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms