Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DNMT3BQ9UBC3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.21■□□□□ 0.67
DNMT3BQ9UBC3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DNMT3BQ9UBC3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DNMT3BQ9UBC3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DNMT3BQ9UBC3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
DNMT3BQ9UBC3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
DNMT3BQ9UBC3 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.21■□□□□ 0.67
DNMT3BQ9UBC3 AC011840.4-201ENST00000578471 627 ntBASIC19.21■□□□□ 0.67
DNMT3BQ9UBC3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DNMT3BQ9UBC3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.21■□□□□ 0.67
DNMT3BQ9UBC3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DNMT3BQ9UBC3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
DNMT3BQ9UBC3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
DNMT3BQ9UBC3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
DNMT3BQ9UBC3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 AL161938.1-201ENST00000569833 2180 ntBASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 AL022342.1-201ENST00000400363 863 ntBASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 NUS1P2-201ENST00000417358 873 ntBASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 AC079776.4-201ENST00000511039 504 ntBASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DNMT3BQ9UBC3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
DNMT3BQ9UBC3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
DNMT3BQ9UBC3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.19■□□□□ 0.66
DNMT3BQ9UBC3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
DNMT3BQ9UBC3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DNMT3BQ9UBC3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DNMT3BQ9UBC3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
DNMT3BQ9UBC3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DNMT3BQ9UBC3 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DNMT3BQ9UBC3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DNMT3BQ9UBC3 AP000593.1-201ENST00000393668 712 ntBASIC19.19■□□□□ 0.66
DNMT3BQ9UBC3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.19■□□□□ 0.66
DNMT3BQ9UBC3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.19■□□□□ 0.66
DNMT3BQ9UBC3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.19■□□□□ 0.66
DNMT3BQ9UBC3 AL662844.1-201ENST00000546340 181 ntBASIC19.19■□□□□ 0.66
DNMT3BQ9UBC3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.19■□□□□ 0.66
DNMT3BQ9UBC3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
DNMT3BQ9UBC3 REXO1L6P-202ENST00000619970 1078 ntBASIC19.19■□□□□ 0.66
DNMT3BQ9UBC3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DNMT3BQ9UBC3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DNMT3BQ9UBC3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.19■□□□□ 0.66
DNMT3BQ9UBC3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.19■□□□□ 0.66
DNMT3BQ9UBC3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.19■□□□□ 0.66
DNMT3BQ9UBC3 AC087289.5-201ENST00000586076 3175 ntBASIC19.19■□□□□ 0.66
DNMT3BQ9UBC3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DNMT3BQ9UBC3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
DNMT3BQ9UBC3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms