Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CALCOCO1Q9P1Z2 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.12■□□□□ 0.81
CALCOCO1Q9P1Z2 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CALCOCO1Q9P1Z2 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC20.12■□□□□ 0.81
CALCOCO1Q9P1Z2 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CALCOCO1Q9P1Z2 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CALCOCO1Q9P1Z2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CALCOCO1Q9P1Z2 RCN1P1-201ENST00000400413 996 ntBASIC20.12■□□□□ 0.81
CALCOCO1Q9P1Z2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CALCOCO1Q9P1Z2 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.12■□□□□ 0.81
CALCOCO1Q9P1Z2 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CALCOCO1Q9P1Z2 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.12■□□□□ 0.81
CALCOCO1Q9P1Z2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.12■□□□□ 0.81
CALCOCO1Q9P1Z2 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CALCOCO1Q9P1Z2 CR392000.1-201ENST00000624770 1228 ntBASIC20.12■□□□□ 0.81
CALCOCO1Q9P1Z2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.12■□□□□ 0.81
CALCOCO1Q9P1Z2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CALCOCO1Q9P1Z2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CALCOCO1Q9P1Z2 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
CALCOCO1Q9P1Z2 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CALCOCO1Q9P1Z2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CALCOCO1Q9P1Z2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CALCOCO1Q9P1Z2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CALCOCO1Q9P1Z2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
CALCOCO1Q9P1Z2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CALCOCO1Q9P1Z2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CALCOCO1Q9P1Z2 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CALCOCO1Q9P1Z2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.12■□□□□ 0.81
CALCOCO1Q9P1Z2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 KSR1P1-201ENST00000446298 240 ntBASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 AC073195.1-201ENST00000607241 877 ntBASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CALCOCO1Q9P1Z2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 MMP23A-201ENST00000234610 1017 ntBASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 AL160286.2-201ENST00000567150 934 ntBASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 KRT8P41-201ENST00000533985 1514 ntBASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CALCOCO1Q9P1Z2 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms