Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHCHD3Q9NX63 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.16■□□□□ 0.34
CHCHD3Q9NX63 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHCHD3Q9NX63 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHCHD3Q9NX63 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHCHD3Q9NX63 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHCHD3Q9NX63 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.16■□□□□ 0.34
CHCHD3Q9NX63 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.16■□□□□ 0.34
CHCHD3Q9NX63 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHCHD3Q9NX63 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.16■□□□□ 0.34
CHCHD3Q9NX63 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.16■□□□□ 0.34
CHCHD3Q9NX63 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.16■□□□□ 0.34
CHCHD3Q9NX63 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.16■□□□□ 0.34
CHCHD3Q9NX63 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHCHD3Q9NX63 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.16■□□□□ 0.34
CHCHD3Q9NX63 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CHCHD3Q9NX63 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.16■□□□□ 0.34
CHCHD3Q9NX63 ABALON-201ENST00000629058 1903 ntBASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 AC011676.5-201ENST00000624864 2660 ntBASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 SDHAP1-207ENST00000440850 2000 ntBASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 AL355472.2-201ENST00000422958 438 ntBASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 ANO7L1-203ENST00000602586 1720 ntBASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 AC104417.2-201ENST00000562989 1793 ntBASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.15■□□□□ 0.34
CHCHD3Q9NX63 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CHCHD3Q9NX63 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CHCHD3Q9NX63 AC068338.2-201ENST00000563278 1430 ntBASIC17.14■□□□□ 0.33
CHCHD3Q9NX63 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.14■□□□□ 0.33
CHCHD3Q9NX63 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHCHD3Q9NX63 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.14■□□□□ 0.33
CHCHD3Q9NX63 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.14■□□□□ 0.33
CHCHD3Q9NX63 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.14■□□□□ 0.33
CHCHD3Q9NX63 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CHCHD3Q9NX63 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CHCHD3Q9NX63 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.14■□□□□ 0.33
CHCHD3Q9NX63 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHCHD3Q9NX63 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CHCHD3Q9NX63 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHCHD3Q9NX63 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CHCHD3Q9NX63 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHCHD3Q9NX63 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHCHD3Q9NX63 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.14■□□□□ 0.33
CHCHD3Q9NX63 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.14■□□□□ 0.33
CHCHD3Q9NX63 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CHCHD3Q9NX63 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHCHD3Q9NX63 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHCHD3Q9NX63 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.14■□□□□ 0.33
CHCHD3Q9NX63 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHCHD3Q9NX63 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHCHD3Q9NX63 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHCHD3Q9NX63 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHCHD3Q9NX63 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHCHD3Q9NX63 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHCHD3Q9NX63 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHCHD3Q9NX63 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.14■□□□□ 0.33
CHCHD3Q9NX63 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
CHCHD3Q9NX63 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHCHD3Q9NX63 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms