Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 GCSHP2-201ENST00000560971 527 ntBASIC17.83■□□□□ 0.44
CUEDC1Q9NWM3 AL441883.1-201ENST00000566170 1045 ntBASIC17.83■□□□□ 0.44
CUEDC1Q9NWM3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.83■□□□□ 0.44
CUEDC1Q9NWM3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
CUEDC1Q9NWM3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.83■□□□□ 0.44
CUEDC1Q9NWM3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.83■□□□□ 0.44
CUEDC1Q9NWM3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.83■□□□□ 0.44
CUEDC1Q9NWM3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.83■□□□□ 0.44
CUEDC1Q9NWM3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.83■□□□□ 0.44
CUEDC1Q9NWM3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CUEDC1Q9NWM3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CUEDC1Q9NWM3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CUEDC1Q9NWM3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
CUEDC1Q9NWM3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CUEDC1Q9NWM3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CUEDC1Q9NWM3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CUEDC1Q9NWM3 MYLKP1-201ENST00000509077 1580 ntBASIC17.83■□□□□ 0.44
CUEDC1Q9NWM3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 YBX1P2-201ENST00000489612 999 ntBASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 AC022616.7-201ENST00000525383 220 ntBASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 AC011558.1-201ENST00000623459 338 ntBASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CUEDC1Q9NWM3 KRT8P7-201ENST00000533003 1432 ntBASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 AP000593.1-201ENST00000393668 712 ntBASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 AP000523.1-201ENST00000398242 1049 ntBASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 AK4P3-201ENST00000418260 669 ntBASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 AC063952.2-201ENST00000498792 1227 ntBASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 AC104390.1-201ENST00000555663 520 ntBASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 MYC-208ENST00000641036 567 ntBASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CUEDC1Q9NWM3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms