Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
KLHL1Q9NR64 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KLHL1Q9NR64 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
KLHL1Q9NR64 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KLHL1Q9NR64 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.38■□□□□ 0.37
KLHL1Q9NR64 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
KLHL1Q9NR64 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL1Q9NR64 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL1Q9NR64 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
KLHL1Q9NR64 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL1Q9NR64 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL1Q9NR64 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL1Q9NR64 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
KLHL1Q9NR64 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL1Q9NR64 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL1Q9NR64 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL1Q9NR64 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL1Q9NR64 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL1Q9NR64 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.37■□□□□ 0.37
KLHL1Q9NR64 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.37■□□□□ 0.37
KLHL1Q9NR64 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.37■□□□□ 0.37
KLHL1Q9NR64 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
KLHL1Q9NR64 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.37■□□□□ 0.37
KLHL1Q9NR64 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL1Q9NR64 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL1Q9NR64 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
KLHL1Q9NR64 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.37■□□□□ 0.37
KLHL1Q9NR64 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL1Q9NR64 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.37■□□□□ 0.37
KLHL1Q9NR64 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL1Q9NR64 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.37■□□□□ 0.37
KLHL1Q9NR64 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL1Q9NR64 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KLHL1Q9NR64 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
KLHL1Q9NR64 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
KLHL1Q9NR64 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
KLHL1Q9NR64 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
KLHL1Q9NR64 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
KLHL1Q9NR64 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KLHL1Q9NR64 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KLHL1Q9NR64 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
KLHL1Q9NR64 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KLHL1Q9NR64 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KLHL1Q9NR64 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
KLHL1Q9NR64 TSPY21P-201ENST00000433481 731 ntBASIC17.36■□□□□ 0.37
KLHL1Q9NR64 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KLHL1Q9NR64 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.36■□□□□ 0.37
KLHL1Q9NR64 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.36■□□□□ 0.37
KLHL1Q9NR64 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KLHL1Q9NR64 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.36■□□□□ 0.37
KLHL1Q9NR64 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KLHL1Q9NR64 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.36■□□□□ 0.37
KLHL1Q9NR64 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.36■□□□□ 0.37
KLHL1Q9NR64 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.36■□□□□ 0.37
KLHL1Q9NR64 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
KLHL1Q9NR64 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
KLHL1Q9NR64 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.36■□□□□ 0.37
KLHL1Q9NR64 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
KLHL1Q9NR64 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
KLHL1Q9NR64 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KLHL1Q9NR64 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KLHL1Q9NR64 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KLHL1Q9NR64 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KLHL1Q9NR64 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.36■□□□□ 0.37
KLHL1Q9NR64 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 AL031133.1-201ENST00000406807 723 ntBASIC17.35■□□□□ 0.37
KLHL1Q9NR64 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 MIR4674-201ENST00000582457 87 ntBASIC17.35■□□□□ 0.37
KLHL1Q9NR64 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.35■□□□□ 0.37
KLHL1Q9NR64 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms