Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.69■□□□□ 0.42
NECTIN3Q9NQS3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NECTIN3Q9NQS3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NECTIN3Q9NQS3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NECTIN3Q9NQS3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NECTIN3Q9NQS3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NECTIN3Q9NQS3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.68■□□□□ 0.42
NECTIN3Q9NQS3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.68■□□□□ 0.42
NECTIN3Q9NQS3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.68■□□□□ 0.42
NECTIN3Q9NQS3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.68■□□□□ 0.42
NECTIN3Q9NQS3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NECTIN3Q9NQS3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NECTIN3Q9NQS3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NECTIN3Q9NQS3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NECTIN3Q9NQS3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.68■□□□□ 0.42
NECTIN3Q9NQS3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.68■□□□□ 0.42
NECTIN3Q9NQS3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NECTIN3Q9NQS3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
NECTIN3Q9NQS3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NECTIN3Q9NQS3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NECTIN3Q9NQS3 AL512353.2-201ENST00000448759 1962 ntBASIC17.68■□□□□ 0.42
NECTIN3Q9NQS3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
NECTIN3Q9NQS3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.67■□□□□ 0.42
NECTIN3Q9NQS3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NECTIN3Q9NQS3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NECTIN3Q9NQS3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.67■□□□□ 0.42
NECTIN3Q9NQS3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NECTIN3Q9NQS3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NECTIN3Q9NQS3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
NECTIN3Q9NQS3 KRT8P45-201ENST00000414328 1447 ntBASIC17.67■□□□□ 0.42
NECTIN3Q9NQS3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NECTIN3Q9NQS3 AC073508.3-201ENST00000619697 1419 ntBASIC17.67■□□□□ 0.42
NECTIN3Q9NQS3 WIZP1-201ENST00000531444 2299 ntBASIC17.67■□□□□ 0.42
NECTIN3Q9NQS3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NECTIN3Q9NQS3 AL023284.2-201ENST00000405850 579 ntBASIC17.67■□□□□ 0.42
NECTIN3Q9NQS3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.67■□□□□ 0.42
NECTIN3Q9NQS3 KRT18P57-201ENST00000443599 1254 ntBASIC17.67■□□□□ 0.42
NECTIN3Q9NQS3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NECTIN3Q9NQS3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.67■□□□□ 0.42
NECTIN3Q9NQS3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NECTIN3Q9NQS3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
NECTIN3Q9NQS3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.67■□□□□ 0.42
NECTIN3Q9NQS3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NECTIN3Q9NQS3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
NECTIN3Q9NQS3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.67■□□□□ 0.42
NECTIN3Q9NQS3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.67■□□□□ 0.42
NECTIN3Q9NQS3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NECTIN3Q9NQS3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NECTIN3Q9NQS3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
NECTIN3Q9NQS3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NECTIN3Q9NQS3 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.66■□□□□ 0.42
NECTIN3Q9NQS3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.66■□□□□ 0.42
NECTIN3Q9NQS3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.66■□□□□ 0.42
NECTIN3Q9NQS3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NECTIN3Q9NQS3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
NECTIN3Q9NQS3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NECTIN3Q9NQS3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NECTIN3Q9NQS3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NECTIN3Q9NQS3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
NECTIN3Q9NQS3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NECTIN3Q9NQS3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NECTIN3Q9NQS3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.66■□□□□ 0.42
NECTIN3Q9NQS3 LIN28AP1-201ENST00000429574 405 ntBASIC17.66■□□□□ 0.42
NECTIN3Q9NQS3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.66■□□□□ 0.42
NECTIN3Q9NQS3 RN7SL850P-201ENST00000579959 291 ntBASIC17.66■□□□□ 0.42
NECTIN3Q9NQS3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NECTIN3Q9NQS3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NECTIN3Q9NQS3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NECTIN3Q9NQS3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.66■□□□□ 0.42
NECTIN3Q9NQS3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NECTIN3Q9NQS3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NECTIN3Q9NQS3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NECTIN3Q9NQS3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.66■□□□□ 0.42
NECTIN3Q9NQS3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NECTIN3Q9NQS3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
NECTIN3Q9NQS3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
NECTIN3Q9NQS3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.66■□□□□ 0.42
NECTIN3Q9NQS3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NECTIN3Q9NQS3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 FAM210CP-201ENST00000445714 574 ntBASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 ATP5G1P1-201ENST00000448724 379 ntBASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms