Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTN4Q9NQC3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.75■■□□□ 1.07
RTN4Q9NQC3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 KRT16P6-202ENST00000425692 1426 ntBASIC21.74■■□□□ 1.07
RTN4Q9NQC3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 MCRIP2P1-201ENST00000394346 511 ntBASIC21.74■■□□□ 1.07
RTN4Q9NQC3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 RARRES2P4-201ENST00000514074 484 ntBASIC21.74■■□□□ 1.07
RTN4Q9NQC3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.74■■□□□ 1.07
RTN4Q9NQC3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RTN4Q9NQC3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RTN4Q9NQC3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTN4Q9NQC3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RTN4Q9NQC3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTN4Q9NQC3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTN4Q9NQC3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RTN4Q9NQC3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTN4Q9NQC3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.73■■□□□ 1.07
RTN4Q9NQC3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTN4Q9NQC3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.73■■□□□ 1.07
RTN4Q9NQC3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTN4Q9NQC3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTN4Q9NQC3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTN4Q9NQC3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTN4Q9NQC3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTN4Q9NQC3 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
RTN4Q9NQC3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC21.73■■□□□ 1.07
RTN4Q9NQC3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 KRT8P20-201ENST00000423953 1409 ntBASIC21.72■■□□□ 1.07
RTN4Q9NQC3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 AP001271.2-201ENST00000624018 1556 ntBASIC21.72■■□□□ 1.07
RTN4Q9NQC3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTN4Q9NQC3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTN4Q9NQC3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
RTN4Q9NQC3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms