Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
EFCC1Q9HA90 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
EFCC1Q9HA90 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC21.43■■□□□ 1.02
EFCC1Q9HA90 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC21.43■■□□□ 1.02
EFCC1Q9HA90 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.43■■□□□ 1.02
EFCC1Q9HA90 AC010240.3-201ENST00000607688 395 ntBASIC21.43■■□□□ 1.02
EFCC1Q9HA90 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
EFCC1Q9HA90 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
EFCC1Q9HA90 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
EFCC1Q9HA90 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
EFCC1Q9HA90 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
EFCC1Q9HA90 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.43■■□□□ 1.02
EFCC1Q9HA90 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
EFCC1Q9HA90 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
EFCC1Q9HA90 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
EFCC1Q9HA90 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
EFCC1Q9HA90 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
EFCC1Q9HA90 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
EFCC1Q9HA90 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
EFCC1Q9HA90 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
EFCC1Q9HA90 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.42■■□□□ 1.02
EFCC1Q9HA90 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
EFCC1Q9HA90 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
EFCC1Q9HA90 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.42■■□□□ 1.02
EFCC1Q9HA90 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
EFCC1Q9HA90 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
EFCC1Q9HA90 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.42■■□□□ 1.02
EFCC1Q9HA90 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
EFCC1Q9HA90 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
EFCC1Q9HA90 VENTXP7-201ENST00000475503 772 ntBASIC21.42■■□□□ 1.02
EFCC1Q9HA90 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC21.42■■□□□ 1.02
EFCC1Q9HA90 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.42■■□□□ 1.02
EFCC1Q9HA90 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.42■■□□□ 1.02
EFCC1Q9HA90 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.42■■□□□ 1.02
EFCC1Q9HA90 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
EFCC1Q9HA90 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.42■■□□□ 1.02
EFCC1Q9HA90 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
EFCC1Q9HA90 AL691403.2-201ENST00000618460 490 ntBASIC21.42■■□□□ 1.02
EFCC1Q9HA90 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
EFCC1Q9HA90 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.41■■□□□ 1.02
EFCC1Q9HA90 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
EFCC1Q9HA90 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
EFCC1Q9HA90 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
EFCC1Q9HA90 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
EFCC1Q9HA90 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
EFCC1Q9HA90 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
EFCC1Q9HA90 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
EFCC1Q9HA90 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
EFCC1Q9HA90 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.41■■□□□ 1.02
EFCC1Q9HA90 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.41■■□□□ 1.02
EFCC1Q9HA90 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC21.41■■□□□ 1.02
EFCC1Q9HA90 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.41■■□□□ 1.02
EFCC1Q9HA90 AC104390.1-201ENST00000555663 520 ntBASIC21.41■■□□□ 1.02
EFCC1Q9HA90 AC009065.1-201ENST00000564055 1225 ntBASIC21.41■■□□□ 1.02
EFCC1Q9HA90 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.41■■□□□ 1.02
EFCC1Q9HA90 AL592071.1-201ENST00000611956 408 ntBASIC21.41■■□□□ 1.02
EFCC1Q9HA90 AC124864.1-201ENST00000623408 392 ntBASIC21.41■■□□□ 1.02
EFCC1Q9HA90 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
EFCC1Q9HA90 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
EFCC1Q9HA90 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.41■■□□□ 1.02
EFCC1Q9HA90 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
EFCC1Q9HA90 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
EFCC1Q9HA90 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
EFCC1Q9HA90 TEX21P-204ENST00000641479 1693 ntBASIC21.4■■□□□ 1.02
EFCC1Q9HA90 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
EFCC1Q9HA90 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
EFCC1Q9HA90 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
EFCC1Q9HA90 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
EFCC1Q9HA90 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
EFCC1Q9HA90 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
EFCC1Q9HA90 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
EFCC1Q9HA90 AC243591.1-201ENST00000452967 1364 ntBASIC21.4■■□□□ 1.02
EFCC1Q9HA90 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
EFCC1Q9HA90 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
EFCC1Q9HA90 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
EFCC1Q9HA90 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
EFCC1Q9HA90 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
EFCC1Q9HA90 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
EFCC1Q9HA90 RPL13AP23-201ENST00000480739 586 ntBASIC21.4■■□□□ 1.02
EFCC1Q9HA90 GUSBP12-201ENST00000513727 720 ntBASIC21.4■■□□□ 1.02
EFCC1Q9HA90 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
EFCC1Q9HA90 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.4■■□□□ 1.02
EFCC1Q9HA90 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
EFCC1Q9HA90 AL355385.1-201ENST00000606123 409 ntBASIC21.4■■□□□ 1.02
EFCC1Q9HA90 AL139424.1-201ENST00000607572 797 ntBASIC21.4■■□□□ 1.02
EFCC1Q9HA90 AC148477.8-201ENST00000624298 468 ntBASIC21.4■■□□□ 1.02
EFCC1Q9HA90 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.4■■□□□ 1.02
EFCC1Q9HA90 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.4■■□□□ 1.02
EFCC1Q9HA90 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
EFCC1Q9HA90 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
EFCC1Q9HA90 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
EFCC1Q9HA90 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
EFCC1Q9HA90 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
EFCC1Q9HA90 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
EFCC1Q9HA90 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
EFCC1Q9HA90 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
EFCC1Q9HA90 AC005082.1-201ENST00000413042 2259 ntBASIC21.39■■□□□ 1.02
EFCC1Q9HA90 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
EFCC1Q9HA90 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC21.39■■□□□ 1.01
EFCC1Q9HA90 GGCT-205ENST00000409436 954 ntTSL 3 BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms