Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 BX276092.2-201ENST00000417668 665 ntBASIC20.11■□□□□ 0.81
KCNF1Q9H3M0 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KCNF1Q9H3M0 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KCNF1Q9H3M0 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
KCNF1Q9H3M0 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC20.11■□□□□ 0.81
KCNF1Q9H3M0 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
KCNF1Q9H3M0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 HTR7P1-201ENST00000538670 1336 ntBASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 MIR638-201ENST00000385237 100 ntBASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 KRT8P11-201ENST00000409686 1436 ntBASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 AL355312.1-201ENST00000407115 2176 ntBASIC20.1■□□□□ 0.81
KCNF1Q9H3M0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
KCNF1Q9H3M0 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
KCNF1Q9H3M0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KCNF1Q9H3M0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KCNF1Q9H3M0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
KCNF1Q9H3M0 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
KCNF1Q9H3M0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KCNF1Q9H3M0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
KCNF1Q9H3M0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.09■□□□□ 0.81
KCNF1Q9H3M0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.09■□□□□ 0.81
KCNF1Q9H3M0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.09■□□□□ 0.81
KCNF1Q9H3M0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
KCNF1Q9H3M0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.09■□□□□ 0.81
KCNF1Q9H3M0 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.09■□□□□ 0.81
KCNF1Q9H3M0 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
KCNF1Q9H3M0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.09■□□□□ 0.81
KCNF1Q9H3M0 AC133552.2-202ENST00000575694 574 ntBASIC20.09■□□□□ 0.81
KCNF1Q9H3M0 AL121829.2-201ENST00000620908 328 ntBASIC20.09■□□□□ 0.81
KCNF1Q9H3M0 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KCNF1Q9H3M0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
KCNF1Q9H3M0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
KCNF1Q9H3M0 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KCNF1Q9H3M0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.09■□□□□ 0.81
KCNF1Q9H3M0 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
KCNF1Q9H3M0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KCNF1Q9H3M0 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KCNF1Q9H3M0 CROCCP2-202ENST00000412962 2773 ntBASIC20.09■□□□□ 0.81
KCNF1Q9H3M0 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KCNF1Q9H3M0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.09■□□□□ 0.81
KCNF1Q9H3M0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.09■□□□□ 0.81
KCNF1Q9H3M0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KCNF1Q9H3M0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KCNF1Q9H3M0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
KCNF1Q9H3M0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KCNF1Q9H3M0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KCNF1Q9H3M0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KCNF1Q9H3M0 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
KCNF1Q9H3M0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
KCNF1Q9H3M0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
KCNF1Q9H3M0 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.08■□□□□ 0.81
KCNF1Q9H3M0 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.08■□□□□ 0.81
KCNF1Q9H3M0 KRT18P41-201ENST00000518924 1277 ntBASIC20.08■□□□□ 0.81
KCNF1Q9H3M0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.08■□□□□ 0.81
KCNF1Q9H3M0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.08■□□□□ 0.81
KCNF1Q9H3M0 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
KCNF1Q9H3M0 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
KCNF1Q9H3M0 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
KCNF1Q9H3M0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
KCNF1Q9H3M0 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
KCNF1Q9H3M0 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
KCNF1Q9H3M0 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
KCNF1Q9H3M0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms