Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.3
RSPO3Q9BXY4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
RSPO3Q9BXY4 KRT8P9-201ENST00000558927 1449 ntBASIC16.96■□□□□ 0.3
RSPO3Q9BXY4 LTB4R2-202ENST00000528054 3092 ntBASIC16.95■□□□□ 0.3
RSPO3Q9BXY4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RSPO3Q9BXY4 GMCL1P1-201ENST00000463439 1581 ntBASIC16.95■□□□□ 0.3
RSPO3Q9BXY4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.95■□□□□ 0.3
RSPO3Q9BXY4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RSPO3Q9BXY4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RSPO3Q9BXY4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RSPO3Q9BXY4 AC007663.1-201ENST00000438948 1240 ntBASIC16.95■□□□□ 0.3
RSPO3Q9BXY4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.95■□□□□ 0.3
RSPO3Q9BXY4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.95■□□□□ 0.3
RSPO3Q9BXY4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.95■□□□□ 0.3
RSPO3Q9BXY4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RSPO3Q9BXY4 AL355075.4-201ENST00000554988 638 ntBASIC16.95■□□□□ 0.3
RSPO3Q9BXY4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.95■□□□□ 0.3
RSPO3Q9BXY4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RSPO3Q9BXY4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.95■□□□□ 0.3
RSPO3Q9BXY4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.95■□□□□ 0.3
RSPO3Q9BXY4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RSPO3Q9BXY4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RSPO3Q9BXY4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RSPO3Q9BXY4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RSPO3Q9BXY4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
RSPO3Q9BXY4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.95■□□□□ 0.3
RSPO3Q9BXY4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.95■□□□□ 0.3
RSPO3Q9BXY4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RSPO3Q9BXY4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.94■□□□□ 0.3
RSPO3Q9BXY4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.94■□□□□ 0.3
RSPO3Q9BXY4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.94■□□□□ 0.3
RSPO3Q9BXY4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
RSPO3Q9BXY4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RSPO3Q9BXY4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RSPO3Q9BXY4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.94■□□□□ 0.3
RSPO3Q9BXY4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RSPO3Q9BXY4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RSPO3Q9BXY4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RSPO3Q9BXY4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.94■□□□□ 0.3
RSPO3Q9BXY4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
RSPO3Q9BXY4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.94■□□□□ 0.3
RSPO3Q9BXY4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.94■□□□□ 0.3
RSPO3Q9BXY4 WWOX-216ENST00000569818 525 ntBASIC16.94■□□□□ 0.3
RSPO3Q9BXY4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RSPO3Q9BXY4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.94■□□□□ 0.3
RSPO3Q9BXY4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RSPO3Q9BXY4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RSPO3Q9BXY4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RSPO3Q9BXY4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RSPO3Q9BXY4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RSPO3Q9BXY4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RSPO3Q9BXY4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.94■□□□□ 0.3
RSPO3Q9BXY4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RSPO3Q9BXY4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 CYP2D8P-201ENST00000433633 1490 ntBASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 FLJ13224-201ENST00000313737 1514 ntBASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 SLC25A6P5-201ENST00000435663 894 ntBASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 AC012317.2-201ENST00000623305 2251 ntBASIC16.93■□□□□ 0.3
RSPO3Q9BXY4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 UNC93B2-201ENST00000285383 730 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms