Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 AL391807.1-203ENST00000604392 2365 ntBASIC19.19■□□□□ 0.66
TRIM62Q9BVG3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TRIM62Q9BVG3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM62Q9BVG3 SDHAP2-201ENST00000455183 2001 ntBASIC19.19■□□□□ 0.66
TRIM62Q9BVG3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM62Q9BVG3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM62Q9BVG3 HBZP1-201ENST00000354915 429 ntBASIC19.19■□□□□ 0.66
TRIM62Q9BVG3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.19■□□□□ 0.66
TRIM62Q9BVG3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM62Q9BVG3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.19■□□□□ 0.66
TRIM62Q9BVG3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.19■□□□□ 0.66
TRIM62Q9BVG3 NTF6B-201ENST00000591913 560 ntBASIC19.19■□□□□ 0.66
TRIM62Q9BVG3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.19■□□□□ 0.66
TRIM62Q9BVG3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM62Q9BVG3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.19■□□□□ 0.66
TRIM62Q9BVG3 KRT89P-201ENST00000620027 1478 ntBASIC19.19■□□□□ 0.66
TRIM62Q9BVG3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TRIM62Q9BVG3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TRIM62Q9BVG3 WIZP1-201ENST00000531444 2299 ntBASIC19.19■□□□□ 0.66
TRIM62Q9BVG3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.19■□□□□ 0.66
TRIM62Q9BVG3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM62Q9BVG3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 AC126763.1-201ENST00000552015 2118 ntBASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 AC087388.1-201ENST00000571370 1112 ntBASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 AL121956.5-201ENST00000625261 221 ntBASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM62Q9BVG3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
TRIM62Q9BVG3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM62Q9BVG3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM62Q9BVG3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM62Q9BVG3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.17■□□□□ 0.66
TRIM62Q9BVG3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM62Q9BVG3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM62Q9BVG3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM62Q9BVG3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
TRIM62Q9BVG3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.17■□□□□ 0.66
TRIM62Q9BVG3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM62Q9BVG3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM62Q9BVG3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM62Q9BVG3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM62Q9BVG3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM62Q9BVG3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM62Q9BVG3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.17■□□□□ 0.66
TRIM62Q9BVG3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM62Q9BVG3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.17■□□□□ 0.66
TRIM62Q9BVG3 ZNF444P1-201ENST00000559497 298 ntBASIC19.17■□□□□ 0.66
TRIM62Q9BVG3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.17■□□□□ 0.66
TRIM62Q9BVG3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.17■□□□□ 0.66
TRIM62Q9BVG3 GMCL1P1-201ENST00000463439 1581 ntBASIC19.17■□□□□ 0.66
TRIM62Q9BVG3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM62Q9BVG3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM62Q9BVG3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.17■□□□□ 0.66
TRIM62Q9BVG3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM62Q9BVG3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM62Q9BVG3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
TRIM62Q9BVG3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TRIM62Q9BVG3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM62Q9BVG3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TRIM62Q9BVG3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM62Q9BVG3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM62Q9BVG3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM62Q9BVG3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM62Q9BVG3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM62Q9BVG3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM62Q9BVG3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM62Q9BVG3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM62Q9BVG3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TRIM62Q9BVG3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.16■□□□□ 0.66
TRIM62Q9BVG3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.16■□□□□ 0.66
TRIM62Q9BVG3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM62Q9BVG3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
TRIM62Q9BVG3 HYMAI.1-201ENST00000620949 238 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms