Protein–RNA interactions for Protein: Q9BV40

VAMP8, Vesicle-associated membrane protein 8, humanhuman

Predictions only

Length 100 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8Q9BV40 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 AC116050.2-201ENST00000612102 1779 ntBASIC13.53□□□□□ -0.24
VAMP8Q9BV40 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
VAMP8Q9BV40 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
VAMP8Q9BV40 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
VAMP8Q9BV40 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
VAMP8Q9BV40 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
VAMP8Q9BV40 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
VAMP8Q9BV40 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.52□□□□□ -0.24
VAMP8Q9BV40 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
VAMP8Q9BV40 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
VAMP8Q9BV40 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
VAMP8Q9BV40 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.52□□□□□ -0.24
VAMP8Q9BV40 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
VAMP8Q9BV40 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
VAMP8Q9BV40 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
VAMP8Q9BV40 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
VAMP8Q9BV40 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
VAMP8Q9BV40 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
VAMP8Q9BV40 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
VAMP8Q9BV40 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
VAMP8Q9BV40 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
VAMP8Q9BV40 KRT16P6-202ENST00000425692 1426 ntBASIC13.52□□□□□ -0.25
VAMP8Q9BV40 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC13.52□□□□□ -0.25
VAMP8Q9BV40 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.52□□□□□ -0.25
VAMP8Q9BV40 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
VAMP8Q9BV40 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.52□□□□□ -0.25
VAMP8Q9BV40 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.52□□□□□ -0.25
VAMP8Q9BV40 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
VAMP8Q9BV40 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
VAMP8Q9BV40 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.52□□□□□ -0.25
VAMP8Q9BV40 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
VAMP8Q9BV40 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
VAMP8Q9BV40 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VAMP8Q9BV40 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
VAMP8Q9BV40 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VAMP8Q9BV40 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VAMP8Q9BV40 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VAMP8Q9BV40 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
VAMP8Q9BV40 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
VAMP8Q9BV40 AC132872.4-202ENST00000622924 2756 ntBASIC13.51□□□□□ -0.25
VAMP8Q9BV40 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP8Q9BV40 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP8Q9BV40 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC13.51□□□□□ -0.25
VAMP8Q9BV40 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
VAMP8Q9BV40 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
VAMP8Q9BV40 FLYWCH1P1-201ENST00000460917 1874 ntBASIC13.51□□□□□ -0.25
VAMP8Q9BV40 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
VAMP8Q9BV40 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC13.51□□□□□ -0.25
VAMP8Q9BV40 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP8Q9BV40 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.51□□□□□ -0.25
VAMP8Q9BV40 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
VAMP8Q9BV40 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP8Q9BV40 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP8Q9BV40 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC13.51□□□□□ -0.25
VAMP8Q9BV40 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP8Q9BV40 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC13.51□□□□□ -0.25
VAMP8Q9BV40 GDI1-215ENST00000630693 786 ntTSL 4 BASIC13.51□□□□□ -0.25
VAMP8Q9BV40 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP8Q9BV40 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP8Q9BV40 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP8Q9BV40 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP8Q9BV40 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP8Q9BV40 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP8Q9BV40 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP8Q9BV40 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms