Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.36■□□□□ 0.37
CPPED1Q9BRF8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.36■□□□□ 0.37
CPPED1Q9BRF8 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.36■□□□□ 0.37
CPPED1Q9BRF8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
CPPED1Q9BRF8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPPED1Q9BRF8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPPED1Q9BRF8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CPPED1Q9BRF8 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPPED1Q9BRF8 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CPPED1Q9BRF8 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPPED1Q9BRF8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CPPED1Q9BRF8 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.36■□□□□ 0.37
CPPED1Q9BRF8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPPED1Q9BRF8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPPED1Q9BRF8 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPPED1Q9BRF8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPPED1Q9BRF8 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPPED1Q9BRF8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.35■□□□□ 0.37
CPPED1Q9BRF8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.35■□□□□ 0.37
CPPED1Q9BRF8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
CPPED1Q9BRF8 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPPED1Q9BRF8 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPPED1Q9BRF8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPPED1Q9BRF8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.35■□□□□ 0.37
CPPED1Q9BRF8 C1QBPP2-201ENST00000528754 825 ntBASIC17.35■□□□□ 0.37
CPPED1Q9BRF8 RARRES2P10-201ENST00000564312 460 ntBASIC17.35■□□□□ 0.37
CPPED1Q9BRF8 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.35■□□□□ 0.37
CPPED1Q9BRF8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.35■□□□□ 0.37
CPPED1Q9BRF8 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPPED1Q9BRF8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPPED1Q9BRF8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPPED1Q9BRF8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.35■□□□□ 0.37
CPPED1Q9BRF8 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CPPED1Q9BRF8 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CPPED1Q9BRF8 AC034236.2-201ENST00000606662 1610 ntBASIC17.35■□□□□ 0.37
CPPED1Q9BRF8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.35■□□□□ 0.37
CPPED1Q9BRF8 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPPED1Q9BRF8 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CPPED1Q9BRF8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPPED1Q9BRF8 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.34■□□□□ 0.37
CPPED1Q9BRF8 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.34■□□□□ 0.37
CPPED1Q9BRF8 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.34■□□□□ 0.37
CPPED1Q9BRF8 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.34■□□□□ 0.37
CPPED1Q9BRF8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPPED1Q9BRF8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPPED1Q9BRF8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPPED1Q9BRF8 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CPPED1Q9BRF8 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CPPED1Q9BRF8 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPPED1Q9BRF8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CPPED1Q9BRF8 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.34■□□□□ 0.37
CPPED1Q9BRF8 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.34■□□□□ 0.37
CPPED1Q9BRF8 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.34■□□□□ 0.37
CPPED1Q9BRF8 AC128676.1-201ENST00000454392 318 ntBASIC17.34■□□□□ 0.37
CPPED1Q9BRF8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.34■□□□□ 0.37
CPPED1Q9BRF8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CPPED1Q9BRF8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.34■□□□□ 0.37
CPPED1Q9BRF8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.34■□□□□ 0.37
CPPED1Q9BRF8 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.34■□□□□ 0.37
CPPED1Q9BRF8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CPPED1Q9BRF8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.34■□□□□ 0.37
CPPED1Q9BRF8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CPPED1Q9BRF8 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CPPED1Q9BRF8 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.33■□□□□ 0.37
CPPED1Q9BRF8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CPPED1Q9BRF8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CPPED1Q9BRF8 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CPPED1Q9BRF8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CPPED1Q9BRF8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CPPED1Q9BRF8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CPPED1Q9BRF8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CPPED1Q9BRF8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CPPED1Q9BRF8 AC096733.2-201ENST00000609937 1394 ntBASIC17.33■□□□□ 0.36
CPPED1Q9BRF8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.33■□□□□ 0.36
CPPED1Q9BRF8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.33■□□□□ 0.36
CPPED1Q9BRF8 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.33■□□□□ 0.36
CPPED1Q9BRF8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CPPED1Q9BRF8 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CPPED1Q9BRF8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CPPED1Q9BRF8 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CPPED1Q9BRF8 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CPPED1Q9BRF8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.33■□□□□ 0.36
CPPED1Q9BRF8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CPPED1Q9BRF8 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CPPED1Q9BRF8 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.32■□□□□ 0.36
CPPED1Q9BRF8 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CPPED1Q9BRF8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CPPED1Q9BRF8 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPPED1Q9BRF8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.32■□□□□ 0.36
CPPED1Q9BRF8 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPPED1Q9BRF8 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPPED1Q9BRF8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPPED1Q9BRF8 FSCN1P1-201ENST00000568912 1481 ntBASIC17.32■□□□□ 0.36
CPPED1Q9BRF8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPPED1Q9BRF8 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CPPED1Q9BRF8 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPPED1Q9BRF8 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.32■□□□□ 0.36
CPPED1Q9BRF8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.32■□□□□ 0.36
CPPED1Q9BRF8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.32■□□□□ 0.36
CPPED1Q9BRF8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms