Protein–RNA interactions for Protein: Q9BQY4

RHOXF2, Rhox homeobox family member 2, humanhuman

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF2Q9BQY4 AL357033.4-201ENST00000617703 1807 ntBASIC19.43■□□□□ 0.7
RHOXF2Q9BQY4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
RHOXF2Q9BQY4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RHOXF2Q9BQY4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RHOXF2Q9BQY4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.43■□□□□ 0.7
RHOXF2Q9BQY4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RHOXF2Q9BQY4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.43■□□□□ 0.7
RHOXF2Q9BQY4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RHOXF2Q9BQY4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHOXF2Q9BQY4 KRT8P45-201ENST00000414328 1447 ntBASIC19.42■□□□□ 0.7
RHOXF2Q9BQY4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHOXF2Q9BQY4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
RHOXF2Q9BQY4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHOXF2Q9BQY4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RHOXF2Q9BQY4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHOXF2Q9BQY4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.42■□□□□ 0.7
RHOXF2Q9BQY4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHOXF2Q9BQY4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RHOXF2Q9BQY4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHOXF2Q9BQY4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RHOXF2Q9BQY4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHOXF2Q9BQY4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHOXF2Q9BQY4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHOXF2Q9BQY4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RHOXF2Q9BQY4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHOXF2Q9BQY4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.42■□□□□ 0.7
RHOXF2Q9BQY4 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.42■□□□□ 0.7
RHOXF2Q9BQY4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.42■□□□□ 0.7
RHOXF2Q9BQY4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHOXF2Q9BQY4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RHOXF2Q9BQY4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHOXF2Q9BQY4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHOXF2Q9BQY4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RHOXF2Q9BQY4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHOXF2Q9BQY4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.42■□□□□ 0.7
RHOXF2Q9BQY4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHOXF2Q9BQY4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RHOXF2Q9BQY4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHOXF2Q9BQY4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.41■□□□□ 0.7
RHOXF2Q9BQY4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RHOXF2Q9BQY4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RHOXF2Q9BQY4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RHOXF2Q9BQY4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RHOXF2Q9BQY4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RHOXF2Q9BQY4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RHOXF2Q9BQY4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RHOXF2Q9BQY4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.41■□□□□ 0.7
RHOXF2Q9BQY4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RHOXF2Q9BQY4 ZNRF2P3-201ENST00000424200 374 ntBASIC19.41■□□□□ 0.7
RHOXF2Q9BQY4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
RHOXF2Q9BQY4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.41■□□□□ 0.7
RHOXF2Q9BQY4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.41■□□□□ 0.7
RHOXF2Q9BQY4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.41■□□□□ 0.7
RHOXF2Q9BQY4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RHOXF2Q9BQY4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.41■□□□□ 0.7
RHOXF2Q9BQY4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.41■□□□□ 0.7
RHOXF2Q9BQY4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RHOXF2Q9BQY4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RHOXF2Q9BQY4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RHOXF2Q9BQY4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.41■□□□□ 0.7
RHOXF2Q9BQY4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RHOXF2Q9BQY4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RHOXF2Q9BQY4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.41■□□□□ 0.7
RHOXF2Q9BQY4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RHOXF2Q9BQY4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RHOXF2Q9BQY4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RHOXF2Q9BQY4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RHOXF2Q9BQY4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RHOXF2Q9BQY4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RHOXF2Q9BQY4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RHOXF2Q9BQY4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RHOXF2Q9BQY4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RHOXF2Q9BQY4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RHOXF2Q9BQY4 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.4■□□□□ 0.7
RHOXF2Q9BQY4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.4■□□□□ 0.7
RHOXF2Q9BQY4 AL160286.2-201ENST00000567150 934 ntBASIC19.4■□□□□ 0.7
RHOXF2Q9BQY4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.4■□□□□ 0.7
RHOXF2Q9BQY4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.4■□□□□ 0.7
RHOXF2Q9BQY4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RHOXF2Q9BQY4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RHOXF2Q9BQY4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RHOXF2Q9BQY4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RHOXF2Q9BQY4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RHOXF2Q9BQY4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.4■□□□□ 0.7
RHOXF2Q9BQY4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RHOXF2Q9BQY4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RHOXF2Q9BQY4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RHOXF2Q9BQY4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.4■□□□□ 0.7
RHOXF2Q9BQY4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RHOXF2Q9BQY4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RHOXF2Q9BQY4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RHOXF2Q9BQY4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.4■□□□□ 0.7
RHOXF2Q9BQY4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RHOXF2Q9BQY4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RHOXF2Q9BQY4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RHOXF2Q9BQY4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.7
RHOXF2Q9BQY4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
RHOXF2Q9BQY4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.7
RHOXF2Q9BQY4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RHOXF2Q9BQY4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms