Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SMOQ99835 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.31■□□□□ 0.68
SMOQ99835 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.31■□□□□ 0.68
SMOQ99835 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMOQ99835 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMOQ99835 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.31■□□□□ 0.68
SMOQ99835 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SMOQ99835 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.3■□□□□ 0.68
SMOQ99835 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.3■□□□□ 0.68
SMOQ99835 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SMOQ99835 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMOQ99835 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMOQ99835 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMOQ99835 AC073592.3-201ENST00000625118 1834 ntBASIC19.3■□□□□ 0.68
SMOQ99835 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMOQ99835 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMOQ99835 LINC01126-201ENST00000623515 1646 ntBASIC19.3■□□□□ 0.68
SMOQ99835 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.3■□□□□ 0.68
SMOQ99835 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SMOQ99835 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.3■□□□□ 0.68
SMOQ99835 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.3■□□□□ 0.68
SMOQ99835 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.3■□□□□ 0.68
SMOQ99835 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.3■□□□□ 0.68
SMOQ99835 AC005332.3-201ENST00000589904 676 ntBASIC19.3■□□□□ 0.68
SMOQ99835 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SMOQ99835 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.3■□□□□ 0.68
SMOQ99835 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMOQ99835 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMOQ99835 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMOQ99835 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SMOQ99835 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SMOQ99835 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMOQ99835 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.3■□□□□ 0.68
SMOQ99835 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMOQ99835 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMOQ99835 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.29■□□□□ 0.68
SMOQ99835 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMOQ99835 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.29■□□□□ 0.68
SMOQ99835 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMOQ99835 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.29■□□□□ 0.68
SMOQ99835 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMOQ99835 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMOQ99835 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.29■□□□□ 0.68
SMOQ99835 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMOQ99835 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.29■□□□□ 0.68
SMOQ99835 IGHGP-201ENST00000390555 1178 ntBASIC19.29■□□□□ 0.68
SMOQ99835 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMOQ99835 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SMOQ99835 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.29■□□□□ 0.68
SMOQ99835 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
SMOQ99835 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.29■□□□□ 0.68
SMOQ99835 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMOQ99835 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMOQ99835 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.29■□□□□ 0.68
SMOQ99835 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.29■□□□□ 0.68
SMOQ99835 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SMOQ99835 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SMOQ99835 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMOQ99835 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SMOQ99835 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMOQ99835 AC016734.2-201ENST00000624325 1377 ntBASIC19.29■□□□□ 0.68
SMOQ99835 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMOQ99835 Z83836.1-201ENST00000624605 1642 ntBASIC19.29■□□□□ 0.68
SMOQ99835 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.29■□□□□ 0.68
SMOQ99835 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMOQ99835 KRT89P-201ENST00000620027 1478 ntBASIC19.28■□□□□ 0.68
SMOQ99835 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMOQ99835 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMOQ99835 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMOQ99835 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMOQ99835 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.28■□□□□ 0.68
SMOQ99835 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMOQ99835 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.28■□□□□ 0.68
SMOQ99835 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMOQ99835 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMOQ99835 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMOQ99835 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMOQ99835 TSPY22P-201ENST00000427496 604 ntBASIC19.28■□□□□ 0.68
SMOQ99835 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMOQ99835 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.28■□□□□ 0.68
SMOQ99835 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.28■□□□□ 0.68
SMOQ99835 AL390719.2-201ENST00000606993 987 ntBASIC19.28■□□□□ 0.68
SMOQ99835 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SMOQ99835 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMOQ99835 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SMOQ99835 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMOQ99835 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMOQ99835 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.28■□□□□ 0.68
SMOQ99835 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.28■□□□□ 0.68
SMOQ99835 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMOQ99835 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.28■□□□□ 0.68
SMOQ99835 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SMOQ99835 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.28■□□□□ 0.68
SMOQ99835 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMOQ99835 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMOQ99835 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMOQ99835 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMOQ99835 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMOQ99835 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.27■□□□□ 0.68
SMOQ99835 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms