Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.62■□□□□ 0.57
PHOX2BQ99453 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.62■□□□□ 0.57
PHOX2BQ99453 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.62■□□□□ 0.57
PHOX2BQ99453 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHOX2BQ99453 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PHOX2BQ99453 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHOX2BQ99453 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHOX2BQ99453 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHOX2BQ99453 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
PHOX2BQ99453 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHOX2BQ99453 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.62■□□□□ 0.57
PHOX2BQ99453 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PHOX2BQ99453 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PHOX2BQ99453 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHOX2BQ99453 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHOX2BQ99453 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHOX2BQ99453 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHOX2BQ99453 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PHOX2BQ99453 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHOX2BQ99453 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.61■□□□□ 0.57
PHOX2BQ99453 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.61■□□□□ 0.57
PHOX2BQ99453 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHOX2BQ99453 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PHOX2BQ99453 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHOX2BQ99453 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHOX2BQ99453 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHOX2BQ99453 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.61■□□□□ 0.57
PHOX2BQ99453 FGFR3P6-201ENST00000457012 610 ntBASIC18.61■□□□□ 0.57
PHOX2BQ99453 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.61■□□□□ 0.57
PHOX2BQ99453 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.61■□□□□ 0.57
PHOX2BQ99453 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.61■□□□□ 0.57
PHOX2BQ99453 BNIP3P18-201ENST00000593976 575 ntBASIC18.61■□□□□ 0.57
PHOX2BQ99453 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHOX2BQ99453 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.61■□□□□ 0.57
PHOX2BQ99453 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.61■□□□□ 0.57
PHOX2BQ99453 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHOX2BQ99453 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHOX2BQ99453 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHOX2BQ99453 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
PHOX2BQ99453 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHOX2BQ99453 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.61■□□□□ 0.57
PHOX2BQ99453 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PHOX2BQ99453 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PHOX2BQ99453 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PHOX2BQ99453 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHOX2BQ99453 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.6■□□□□ 0.57
PHOX2BQ99453 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PHOX2BQ99453 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHOX2BQ99453 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PHOX2BQ99453 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHOX2BQ99453 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHOX2BQ99453 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHOX2BQ99453 POM121L3P-201ENST00000419331 1163 ntBASIC18.6■□□□□ 0.57
PHOX2BQ99453 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
PHOX2BQ99453 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.6■□□□□ 0.57
PHOX2BQ99453 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PHOX2BQ99453 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PHOX2BQ99453 VENTXP7-201ENST00000475503 772 ntBASIC18.6■□□□□ 0.57
PHOX2BQ99453 AC092910.1-201ENST00000482027 1129 ntBASIC18.6■□□□□ 0.57
PHOX2BQ99453 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.6■□□□□ 0.57
PHOX2BQ99453 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.6■□□□□ 0.57
PHOX2BQ99453 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.6■□□□□ 0.57
PHOX2BQ99453 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.6■□□□□ 0.57
PHOX2BQ99453 Z83851.2-201ENST00000609564 659 ntBASIC18.6■□□□□ 0.57
PHOX2BQ99453 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PHOX2BQ99453 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHOX2BQ99453 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHOX2BQ99453 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.6■□□□□ 0.57
PHOX2BQ99453 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PHOX2BQ99453 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PHOX2BQ99453 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PHOX2BQ99453 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHOX2BQ99453 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PHOX2BQ99453 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.59■□□□□ 0.57
PHOX2BQ99453 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
PHOX2BQ99453 RPS2P28-201ENST00000314255 741 ntBASIC18.59■□□□□ 0.57
PHOX2BQ99453 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHOX2BQ99453 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.59■□□□□ 0.57
PHOX2BQ99453 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PHOX2BQ99453 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHOX2BQ99453 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHOX2BQ99453 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PHOX2BQ99453 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHOX2BQ99453 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.59■□□□□ 0.57
PHOX2BQ99453 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHOX2BQ99453 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHOX2BQ99453 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHOX2BQ99453 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHOX2BQ99453 RNA5SP415-201ENST00000517246 115 ntBASIC18.59■□□□□ 0.57
PHOX2BQ99453 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.59■□□□□ 0.57
PHOX2BQ99453 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.59■□□□□ 0.57
PHOX2BQ99453 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC18.59■□□□□ 0.57
PHOX2BQ99453 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.59■□□□□ 0.57
PHOX2BQ99453 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PHOX2BQ99453 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHOX2BQ99453 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.59■□□□□ 0.57
PHOX2BQ99453 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PHOX2BQ99453 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHOX2BQ99453 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHOX2BQ99453 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms