Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CITED4Q96RK1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CITED4Q96RK1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CITED4Q96RK1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.82■□□□□ 0.12
CITED4Q96RK1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC15.82■□□□□ 0.12
CITED4Q96RK1 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.82■□□□□ 0.12
CITED4Q96RK1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CITED4Q96RK1 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
CITED4Q96RK1 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CITED4Q96RK1 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CITED4Q96RK1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CITED4Q96RK1 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CITED4Q96RK1 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.82■□□□□ 0.12
CITED4Q96RK1 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.81■□□□□ 0.12
CITED4Q96RK1 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CITED4Q96RK1 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.81■□□□□ 0.12
CITED4Q96RK1 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CITED4Q96RK1 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.81■□□□□ 0.12
CITED4Q96RK1 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CITED4Q96RK1 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CITED4Q96RK1 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CITED4Q96RK1 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CITED4Q96RK1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CITED4Q96RK1 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CITED4Q96RK1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.81■□□□□ 0.12
CITED4Q96RK1 DPP3P2-201ENST00000416030 1696 ntBASIC15.81■□□□□ 0.12
CITED4Q96RK1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC15.81■□□□□ 0.12
CITED4Q96RK1 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CITED4Q96RK1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CITED4Q96RK1 KRT87P-202ENST00000534226 1464 ntBASIC15.81■□□□□ 0.12
CITED4Q96RK1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CITED4Q96RK1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.81■□□□□ 0.12
CITED4Q96RK1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CITED4Q96RK1 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.81■□□□□ 0.12
CITED4Q96RK1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.81■□□□□ 0.12
CITED4Q96RK1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CITED4Q96RK1 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CITED4Q96RK1 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CITED4Q96RK1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC15.81■□□□□ 0.12
CITED4Q96RK1 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CITED4Q96RK1 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CITED4Q96RK1 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CITED4Q96RK1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CITED4Q96RK1 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.8■□□□□ 0.12
CITED4Q96RK1 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CITED4Q96RK1 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CITED4Q96RK1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CITED4Q96RK1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC15.8■□□□□ 0.12
CITED4Q96RK1 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CITED4Q96RK1 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CITED4Q96RK1 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.8■□□□□ 0.12
CITED4Q96RK1 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.8■□□□□ 0.12
CITED4Q96RK1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.8■□□□□ 0.12
CITED4Q96RK1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CITED4Q96RK1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CITED4Q96RK1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CITED4Q96RK1 GPX1P1-201ENST00000388829 606 ntBASIC15.8■□□□□ 0.12
CITED4Q96RK1 CD99P1-205ENST00000527459 561 ntBASIC15.8■□□□□ 0.12
CITED4Q96RK1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC15.8■□□□□ 0.12
CITED4Q96RK1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC15.8■□□□□ 0.12
CITED4Q96RK1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CITED4Q96RK1 AC104187.1-201ENST00000607510 612 ntBASIC15.8■□□□□ 0.12
CITED4Q96RK1 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.8■□□□□ 0.12
CITED4Q96RK1 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CITED4Q96RK1 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CITED4Q96RK1 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CITED4Q96RK1 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CITED4Q96RK1 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CITED4Q96RK1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CITED4Q96RK1 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CITED4Q96RK1 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CITED4Q96RK1 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CITED4Q96RK1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CITED4Q96RK1 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CITED4Q96RK1 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CITED4Q96RK1 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.79■□□□□ 0.12
CITED4Q96RK1 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CITED4Q96RK1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CITED4Q96RK1 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CITED4Q96RK1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.79■□□□□ 0.12
CITED4Q96RK1 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CITED4Q96RK1 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CITED4Q96RK1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CITED4Q96RK1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC15.79■□□□□ 0.12
CITED4Q96RK1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CITED4Q96RK1 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CITED4Q96RK1 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CITED4Q96RK1 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CITED4Q96RK1 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CITED4Q96RK1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CITED4Q96RK1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CITED4Q96RK1 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.79■□□□□ 0.12
CITED4Q96RK1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CITED4Q96RK1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CITED4Q96RK1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CITED4Q96RK1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CITED4Q96RK1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC15.79■□□□□ 0.12
CITED4Q96RK1 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC15.79■□□□□ 0.12
CITED4Q96RK1 MIR663A-201ENST00000385250 93 ntBASIC15.79■□□□□ 0.12
CITED4Q96RK1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms