Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNX27Q96L92 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNX27Q96L92 Z83836.1-201ENST00000624605 1642 ntBASIC19.87■□□□□ 0.77
SNX27Q96L92 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.87■□□□□ 0.77
SNX27Q96L92 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNX27Q96L92 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX27Q96L92 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX27Q96L92 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX27Q96L92 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SNX27Q96L92 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX27Q96L92 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX27Q96L92 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX27Q96L92 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.86■□□□□ 0.77
SNX27Q96L92 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNX27Q96L92 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNX27Q96L92 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.86■□□□□ 0.77
SNX27Q96L92 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.86■□□□□ 0.77
SNX27Q96L92 FAM220CP-201ENST00000395253 831 ntBASIC19.86■□□□□ 0.77
SNX27Q96L92 AC005332.3-201ENST00000589904 676 ntBASIC19.86■□□□□ 0.77
SNX27Q96L92 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.86■□□□□ 0.77
SNX27Q96L92 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.86■□□□□ 0.77
SNX27Q96L92 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX27Q96L92 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.86■□□□□ 0.77
SNX27Q96L92 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNX27Q96L92 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNX27Q96L92 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX27Q96L92 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.86■□□□□ 0.77
SNX27Q96L92 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.86■□□□□ 0.77
SNX27Q96L92 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX27Q96L92 KRT89P-201ENST00000620027 1478 ntBASIC19.86■□□□□ 0.77
SNX27Q96L92 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX27Q96L92 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SNX27Q96L92 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX27Q96L92 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SNX27Q96L92 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX27Q96L92 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.85■□□□□ 0.77
SNX27Q96L92 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX27Q96L92 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX27Q96L92 IGHGP-201ENST00000390555 1178 ntBASIC19.85■□□□□ 0.77
SNX27Q96L92 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.85■□□□□ 0.77
SNX27Q96L92 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.85■□□□□ 0.77
SNX27Q96L92 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.85■□□□□ 0.77
SNX27Q96L92 AC117500.6-201ENST00000624871 588 ntBASIC19.85■□□□□ 0.77
SNX27Q96L92 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SNX27Q96L92 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX27Q96L92 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.85■□□□□ 0.77
SNX27Q96L92 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
SNX27Q96L92 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SNX27Q96L92 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SNX27Q96L92 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNX27Q96L92 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNX27Q96L92 AP000974.1-201ENST00000623909 2387 ntBASIC19.84■□□□□ 0.77
SNX27Q96L92 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNX27Q96L92 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SNX27Q96L92 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.84■□□□□ 0.77
SNX27Q96L92 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNX27Q96L92 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNX27Q96L92 AP002383.4-201ENST00000442518 975 ntBASIC19.84■□□□□ 0.77
SNX27Q96L92 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.84■□□□□ 0.77
SNX27Q96L92 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.84■□□□□ 0.77
SNX27Q96L92 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SNX27Q96L92 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.84■□□□□ 0.77
SNX27Q96L92 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.84■□□□□ 0.77
SNX27Q96L92 GPR32P1-201ENST00000601788 811 ntBASIC19.84■□□□□ 0.77
SNX27Q96L92 AL355385.1-201ENST00000606123 409 ntBASIC19.84■□□□□ 0.77
SNX27Q96L92 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SNX27Q96L92 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
SNX27Q96L92 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNX27Q96L92 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SNX27Q96L92 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
SNX27Q96L92 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNX27Q96L92 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
SNX27Q96L92 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.83■□□□□ 0.77
SNX27Q96L92 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNX27Q96L92 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
SNX27Q96L92 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
SNX27Q96L92 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SNX27Q96L92 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.83■□□□□ 0.77
SNX27Q96L92 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.83■□□□□ 0.77
SNX27Q96L92 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNX27Q96L92 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.83■□□□□ 0.77
SNX27Q96L92 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.83■□□□□ 0.77
SNX27Q96L92 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNX27Q96L92 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SNX27Q96L92 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
SNX27Q96L92 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNX27Q96L92 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNX27Q96L92 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SNX27Q96L92 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.83■□□□□ 0.77
SNX27Q96L92 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.83■□□□□ 0.77
SNX27Q96L92 CHCHD2P8-201ENST00000429873 447 ntBASIC19.83■□□□□ 0.77
SNX27Q96L92 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.83■□□□□ 0.77
SNX27Q96L92 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.83■□□□□ 0.77
SNX27Q96L92 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.83■□□□□ 0.77
SNX27Q96L92 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.83■□□□□ 0.77
SNX27Q96L92 AC092119.3-201ENST00000612618 583 ntBASIC19.83■□□□□ 0.77
SNX27Q96L92 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.83■□□□□ 0.77
SNX27Q96L92 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SNX27Q96L92 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNX27Q96L92 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms