Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AL023803.3-201ENST00000615559 522 ntBASIC19.01■□□□□ 0.63
IFT43Q96FT9 AL133373.2-201ENST00000623187 2828 ntBASIC19.01■□□□□ 0.63
IFT43Q96FT9 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
IFT43Q96FT9 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IFT43Q96FT9 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.01■□□□□ 0.63
IFT43Q96FT9 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19■□□□□ 0.63
IFT43Q96FT9 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IFT43Q96FT9 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
IFT43Q96FT9 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
IFT43Q96FT9 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
IFT43Q96FT9 TBC1D3P2-202ENST00000577902 1649 ntBASIC19■□□□□ 0.63
IFT43Q96FT9 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
IFT43Q96FT9 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
IFT43Q96FT9 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19■□□□□ 0.63
IFT43Q96FT9 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19■□□□□ 0.63
IFT43Q96FT9 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IFT43Q96FT9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
IFT43Q96FT9 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IFT43Q96FT9 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19■□□□□ 0.63
IFT43Q96FT9 AC007663.1-201ENST00000438948 1240 ntBASIC19■□□□□ 0.63
IFT43Q96FT9 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IFT43Q96FT9 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19■□□□□ 0.63
IFT43Q96FT9 NTF6B-201ENST00000591913 560 ntBASIC19■□□□□ 0.63
IFT43Q96FT9 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19■□□□□ 0.63
IFT43Q96FT9 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19■□□□□ 0.63
IFT43Q96FT9 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19■□□□□ 0.63
IFT43Q96FT9 AL138966.2-201ENST00000621997 464 ntBASIC19■□□□□ 0.63
IFT43Q96FT9 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19■□□□□ 0.63
IFT43Q96FT9 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IFT43Q96FT9 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19■□□□□ 0.63
IFT43Q96FT9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IFT43Q96FT9 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
IFT43Q96FT9 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19■□□□□ 0.63
IFT43Q96FT9 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19■□□□□ 0.63
IFT43Q96FT9 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
IFT43Q96FT9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
IFT43Q96FT9 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19■□□□□ 0.63
IFT43Q96FT9 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19■□□□□ 0.63
IFT43Q96FT9 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.99■□□□□ 0.63
IFT43Q96FT9 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IFT43Q96FT9 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IFT43Q96FT9 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
IFT43Q96FT9 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
IFT43Q96FT9 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IFT43Q96FT9 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IFT43Q96FT9 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IFT43Q96FT9 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IFT43Q96FT9 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IFT43Q96FT9 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IFT43Q96FT9 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IFT43Q96FT9 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
IFT43Q96FT9 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.99■□□□□ 0.63
IFT43Q96FT9 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.99■□□□□ 0.63
IFT43Q96FT9 AL353719.1-201ENST00000566847 864 ntBASIC18.99■□□□□ 0.63
IFT43Q96FT9 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
IFT43Q96FT9 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
IFT43Q96FT9 AC068587.9-201ENST00000641814 219 ntBASIC18.99■□□□□ 0.63
IFT43Q96FT9 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IFT43Q96FT9 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
IFT43Q96FT9 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.99■□□□□ 0.63
IFT43Q96FT9 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
IFT43Q96FT9 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.99■□□□□ 0.63
IFT43Q96FT9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
IFT43Q96FT9 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.99■□□□□ 0.63
IFT43Q96FT9 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.99■□□□□ 0.63
IFT43Q96FT9 Z98044.1-201ENST00000632503 1764 ntBASIC18.98■□□□□ 0.63
IFT43Q96FT9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
IFT43Q96FT9 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
IFT43Q96FT9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.98■□□□□ 0.63
IFT43Q96FT9 AC093525.10-201ENST00000625130 1569 ntBASIC18.98■□□□□ 0.63
IFT43Q96FT9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.98■□□□□ 0.63
IFT43Q96FT9 FZD10-202ENST00000539839 3282 ntBASIC18.98■□□□□ 0.63
IFT43Q96FT9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
IFT43Q96FT9 HTR7P1-202ENST00000624664 4411 ntBASIC18.98■□□□□ 0.63
IFT43Q96FT9 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IFT43Q96FT9 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
IFT43Q96FT9 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.98■□□□□ 0.63
IFT43Q96FT9 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.98■□□□□ 0.63
IFT43Q96FT9 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IFT43Q96FT9 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IFT43Q96FT9 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IFT43Q96FT9 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.98■□□□□ 0.63
IFT43Q96FT9 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.98■□□□□ 0.63
IFT43Q96FT9 AK4P3-201ENST00000418260 669 ntBASIC18.98■□□□□ 0.63
IFT43Q96FT9 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
IFT43Q96FT9 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.98■□□□□ 0.63
IFT43Q96FT9 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.98■□□□□ 0.63
IFT43Q96FT9 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.98■□□□□ 0.63
IFT43Q96FT9 AC008622.2-201ENST00000617006 1229 ntBASIC18.98■□□□□ 0.63
IFT43Q96FT9 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
IFT43Q96FT9 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
IFT43Q96FT9 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IFT43Q96FT9 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.98■□□□□ 0.63
IFT43Q96FT9 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
IFT43Q96FT9 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.97■□□□□ 0.63
IFT43Q96FT9 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
IFT43Q96FT9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.97■□□□□ 0.63
IFT43Q96FT9 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IFT43Q96FT9 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IFT43Q96FT9 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms