Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
APH1AQ96BI3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
APH1AQ96BI3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.35■□□□□ 0.21
APH1AQ96BI3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
APH1AQ96BI3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
APH1AQ96BI3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
APH1AQ96BI3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
APH1AQ96BI3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
APH1AQ96BI3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
APH1AQ96BI3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
APH1AQ96BI3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.34■□□□□ 0.21
APH1AQ96BI3 ARMC10P1-201ENST00000313754 855 ntBASIC16.34■□□□□ 0.21
APH1AQ96BI3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
APH1AQ96BI3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.34■□□□□ 0.21
APH1AQ96BI3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
APH1AQ96BI3 AC112907.2-201ENST00000448639 330 ntBASIC16.34■□□□□ 0.21
APH1AQ96BI3 KRT18P38-201ENST00000449496 1282 ntBASIC16.34■□□□□ 0.21
APH1AQ96BI3 AL671277.2-201ENST00000458060 996 ntBASIC16.34■□□□□ 0.21
APH1AQ96BI3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.34■□□□□ 0.21
APH1AQ96BI3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.34■□□□□ 0.21
APH1AQ96BI3 AL445228.2-201ENST00000605589 952 ntBASIC16.34■□□□□ 0.21
APH1AQ96BI3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.34■□□□□ 0.21
APH1AQ96BI3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
APH1AQ96BI3 TNXA-203ENST00000507684 2038 ntBASIC16.34■□□□□ 0.21
APH1AQ96BI3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
APH1AQ96BI3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
APH1AQ96BI3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
APH1AQ96BI3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
APH1AQ96BI3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
APH1AQ96BI3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
APH1AQ96BI3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
APH1AQ96BI3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
APH1AQ96BI3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
APH1AQ96BI3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
APH1AQ96BI3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.33■□□□□ 0.21
APH1AQ96BI3 AL499627.1-201ENST00000569373 2188 ntBASIC16.33■□□□□ 0.2
APH1AQ96BI3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.33■□□□□ 0.2
APH1AQ96BI3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
APH1AQ96BI3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.33■□□□□ 0.2
APH1AQ96BI3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.33■□□□□ 0.2
APH1AQ96BI3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.33■□□□□ 0.2
APH1AQ96BI3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.33■□□□□ 0.2
APH1AQ96BI3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
APH1AQ96BI3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.33■□□□□ 0.2
APH1AQ96BI3 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.33■□□□□ 0.2
APH1AQ96BI3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.33■□□□□ 0.2
APH1AQ96BI3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.33■□□□□ 0.2
APH1AQ96BI3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.33■□□□□ 0.2
APH1AQ96BI3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
APH1AQ96BI3 AL163051.1-201ENST00000569214 1512 ntBASIC16.33■□□□□ 0.2
APH1AQ96BI3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
APH1AQ96BI3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
APH1AQ96BI3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
APH1AQ96BI3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
APH1AQ96BI3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
APH1AQ96BI3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.33■□□□□ 0.2
APH1AQ96BI3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
APH1AQ96BI3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
APH1AQ96BI3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
APH1AQ96BI3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
APH1AQ96BI3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
APH1AQ96BI3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
APH1AQ96BI3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
APH1AQ96BI3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
APH1AQ96BI3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
APH1AQ96BI3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APH1AQ96BI3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
APH1AQ96BI3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
APH1AQ96BI3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APH1AQ96BI3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APH1AQ96BI3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APH1AQ96BI3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
APH1AQ96BI3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APH1AQ96BI3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
APH1AQ96BI3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APH1AQ96BI3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
APH1AQ96BI3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
APH1AQ96BI3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
APH1AQ96BI3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.32■□□□□ 0.2
APH1AQ96BI3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.32■□□□□ 0.2
APH1AQ96BI3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APH1AQ96BI3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
APH1AQ96BI3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
APH1AQ96BI3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
APH1AQ96BI3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
APH1AQ96BI3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
APH1AQ96BI3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APH1AQ96BI3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.32■□□□□ 0.2
APH1AQ96BI3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
APH1AQ96BI3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
APH1AQ96BI3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
APH1AQ96BI3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APH1AQ96BI3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.32■□□□□ 0.2
APH1AQ96BI3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APH1AQ96BI3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
APH1AQ96BI3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.31■□□□□ 0.2
APH1AQ96BI3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APH1AQ96BI3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
APH1AQ96BI3 LINC01311-201ENST00000565162 1445 ntBASIC16.31■□□□□ 0.2
APH1AQ96BI3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms