Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP13Q92995 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
USP13Q92995 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
USP13Q92995 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP13Q92995 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP13Q92995 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
USP13Q92995 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP13Q92995 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP13Q92995 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.29■□□□□ 0.68
USP13Q92995 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP13Q92995 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP13Q92995 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
USP13Q92995 AC034236.2-201ENST00000606662 1610 ntBASIC19.29■□□□□ 0.68
USP13Q92995 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP13Q92995 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP13Q92995 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP13Q92995 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP13Q92995 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.29■□□□□ 0.68
USP13Q92995 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP13Q92995 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP13Q92995 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.29■□□□□ 0.68
USP13Q92995 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.29■□□□□ 0.68
USP13Q92995 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP13Q92995 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
USP13Q92995 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP13Q92995 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP13Q92995 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP13Q92995 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP13Q92995 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP13Q92995 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
USP13Q92995 TSPY22P-201ENST00000427496 604 ntBASIC19.29■□□□□ 0.68
USP13Q92995 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.29■□□□□ 0.68
USP13Q92995 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.29■□□□□ 0.68
USP13Q92995 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.29■□□□□ 0.68
USP13Q92995 MIR3652-201ENST00000579335 131 ntBASIC19.29■□□□□ 0.68
USP13Q92995 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.29■□□□□ 0.68
USP13Q92995 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
USP13Q92995 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP13Q92995 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP13Q92995 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP13Q92995 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP13Q92995 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
USP13Q92995 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP13Q92995 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
USP13Q92995 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP13Q92995 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
USP13Q92995 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
USP13Q92995 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP13Q92995 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP13Q92995 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP13Q92995 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP13Q92995 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP13Q92995 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP13Q92995 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
USP13Q92995 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.28■□□□□ 0.68
USP13Q92995 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP13Q92995 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP13Q92995 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP13Q92995 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP13Q92995 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP13Q92995 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP13Q92995 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP13Q92995 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.28■□□□□ 0.68
USP13Q92995 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
USP13Q92995 AP002414.4-201ENST00000589764 1148 ntBASIC19.28■□□□□ 0.68
USP13Q92995 AC068587.9-201ENST00000641814 219 ntBASIC19.28■□□□□ 0.68
USP13Q92995 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP13Q92995 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.28■□□□□ 0.68
USP13Q92995 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP13Q92995 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.28■□□□□ 0.68
USP13Q92995 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP13Q92995 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.28■□□□□ 0.68
USP13Q92995 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USP13Q92995 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.27■□□□□ 0.68
USP13Q92995 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.27■□□□□ 0.68
USP13Q92995 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
USP13Q92995 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.27■□□□□ 0.68
USP13Q92995 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.27■□□□□ 0.68
USP13Q92995 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.27■□□□□ 0.68
USP13Q92995 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP13Q92995 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USP13Q92995 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP13Q92995 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP13Q92995 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USP13Q92995 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.27■□□□□ 0.68
USP13Q92995 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.27■□□□□ 0.68
USP13Q92995 CHCHD2P8-201ENST00000429873 447 ntBASIC19.27■□□□□ 0.68
USP13Q92995 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USP13Q92995 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.27■□□□□ 0.68
USP13Q92995 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.27■□□□□ 0.68
USP13Q92995 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.27■□□□□ 0.68
USP13Q92995 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.27■□□□□ 0.68
USP13Q92995 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.27■□□□□ 0.68
USP13Q92995 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP13Q92995 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
USP13Q92995 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
USP13Q92995 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP13Q92995 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.27■□□□□ 0.68
USP13Q92995 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
USP13Q92995 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms