Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
BRF1Q92994 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
BRF1Q92994 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.71■■□□□ 1.07
BRF1Q92994 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
BRF1Q92994 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BRF1Q92994 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
BRF1Q92994 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
BRF1Q92994 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BRF1Q92994 KRT8P7-201ENST00000533003 1432 ntBASIC21.71■■□□□ 1.07
BRF1Q92994 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.71■■□□□ 1.07
BRF1Q92994 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
BRF1Q92994 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
BRF1Q92994 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
BRF1Q92994 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.7■■□□□ 1.07
BRF1Q92994 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.7■■□□□ 1.07
BRF1Q92994 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
BRF1Q92994 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
BRF1Q92994 AL162741.1-201ENST00000565563 1558 ntBASIC21.7■■□□□ 1.06
BRF1Q92994 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
BRF1Q92994 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
BRF1Q92994 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BRF1Q92994 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
BRF1Q92994 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.7■■□□□ 1.06
BRF1Q92994 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.7■■□□□ 1.06
BRF1Q92994 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
BRF1Q92994 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.7■■□□□ 1.06
BRF1Q92994 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BRF1Q92994 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.7■■□□□ 1.06
BRF1Q92994 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
BRF1Q92994 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BRF1Q92994 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BRF1Q92994 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.7■■□□□ 1.06
BRF1Q92994 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
BRF1Q92994 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
BRF1Q92994 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.7■■□□□ 1.06
BRF1Q92994 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
BRF1Q92994 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
BRF1Q92994 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BRF1Q92994 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BRF1Q92994 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
BRF1Q92994 SDHAP2-201ENST00000455183 2001 ntBASIC21.7■■□□□ 1.06
BRF1Q92994 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
BRF1Q92994 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BRF1Q92994 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.7■■□□□ 1.06
BRF1Q92994 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
BRF1Q92994 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.7■■□□□ 1.06
BRF1Q92994 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.7■■□□□ 1.06
BRF1Q92994 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
BRF1Q92994 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.7■■□□□ 1.06
BRF1Q92994 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRF1Q92994 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
BRF1Q92994 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.69■■□□□ 1.06
BRF1Q92994 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRF1Q92994 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
BRF1Q92994 AC093677.2-201ENST00000600169 1863 ntBASIC21.69■■□□□ 1.06
BRF1Q92994 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRF1Q92994 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
BRF1Q92994 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRF1Q92994 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
BRF1Q92994 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.69■■□□□ 1.06
BRF1Q92994 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
BRF1Q92994 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRF1Q92994 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.69■■□□□ 1.06
BRF1Q92994 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.69■■□□□ 1.06
BRF1Q92994 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.69■■□□□ 1.06
BRF1Q92994 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRF1Q92994 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRF1Q92994 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRF1Q92994 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRF1Q92994 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRF1Q92994 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRF1Q92994 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRF1Q92994 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.69■■□□□ 1.06
BRF1Q92994 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRF1Q92994 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.69■■□□□ 1.06
BRF1Q92994 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
BRF1Q92994 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRF1Q92994 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
BRF1Q92994 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
BRF1Q92994 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRF1Q92994 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
BRF1Q92994 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRF1Q92994 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRF1Q92994 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
BRF1Q92994 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
BRF1Q92994 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
BRF1Q92994 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.68■■□□□ 1.06
BRF1Q92994 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
BRF1Q92994 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.68■■□□□ 1.06
BRF1Q92994 AC104390.1-201ENST00000555663 520 ntBASIC21.68■■□□□ 1.06
BRF1Q92994 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.68■■□□□ 1.06
BRF1Q92994 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.68■■□□□ 1.06
BRF1Q92994 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.68■■□□□ 1.06
BRF1Q92994 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
BRF1Q92994 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
BRF1Q92994 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRF1Q92994 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
BRF1Q92994 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
BRF1Q92994 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRF1Q92994 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms