Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTCD2Q8WV60 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.67■□□□□ 0.58
PTCD2Q8WV60 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.67■□□□□ 0.58
PTCD2Q8WV60 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTCD2Q8WV60 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTCD2Q8WV60 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTCD2Q8WV60 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.67■□□□□ 0.58
PTCD2Q8WV60 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTCD2Q8WV60 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.67■□□□□ 0.58
PTCD2Q8WV60 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.67■□□□□ 0.58
PTCD2Q8WV60 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.67■□□□□ 0.58
PTCD2Q8WV60 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC18.67■□□□□ 0.58
PTCD2Q8WV60 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.67■□□□□ 0.58
PTCD2Q8WV60 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTCD2Q8WV60 AC141257.4-201ENST00000634557 245 ntBASIC18.67■□□□□ 0.58
PTCD2Q8WV60 AC136944.6-201ENST00000634818 245 ntBASIC18.67■□□□□ 0.58
PTCD2Q8WV60 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PTCD2Q8WV60 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.67■□□□□ 0.58
PTCD2Q8WV60 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTCD2Q8WV60 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTCD2Q8WV60 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.67■□□□□ 0.58
PTCD2Q8WV60 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTCD2Q8WV60 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTCD2Q8WV60 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTCD2Q8WV60 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PTCD2Q8WV60 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTCD2Q8WV60 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTCD2Q8WV60 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTCD2Q8WV60 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.67■□□□□ 0.58
PTCD2Q8WV60 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTCD2Q8WV60 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTCD2Q8WV60 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PTCD2Q8WV60 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PTCD2Q8WV60 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.66■□□□□ 0.58
PTCD2Q8WV60 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.66■□□□□ 0.58
PTCD2Q8WV60 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PTCD2Q8WV60 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.66■□□□□ 0.58
PTCD2Q8WV60 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTCD2Q8WV60 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PTCD2Q8WV60 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTCD2Q8WV60 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTCD2Q8WV60 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.66■□□□□ 0.58
PTCD2Q8WV60 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTCD2Q8WV60 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTCD2Q8WV60 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PTCD2Q8WV60 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PTCD2Q8WV60 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
PTCD2Q8WV60 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.66■□□□□ 0.58
PTCD2Q8WV60 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTCD2Q8WV60 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
PTCD2Q8WV60 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PTCD2Q8WV60 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTCD2Q8WV60 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.66■□□□□ 0.58
PTCD2Q8WV60 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTCD2Q8WV60 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTCD2Q8WV60 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.66■□□□□ 0.58
PTCD2Q8WV60 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTCD2Q8WV60 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PTCD2Q8WV60 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.66■□□□□ 0.58
PTCD2Q8WV60 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
PTCD2Q8WV60 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PTCD2Q8WV60 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTCD2Q8WV60 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
PTCD2Q8WV60 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTCD2Q8WV60 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTCD2Q8WV60 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTCD2Q8WV60 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTCD2Q8WV60 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PTCD2Q8WV60 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTCD2Q8WV60 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
PTCD2Q8WV60 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTCD2Q8WV60 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PTCD2Q8WV60 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.65■□□□□ 0.58
PTCD2Q8WV60 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTCD2Q8WV60 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTCD2Q8WV60 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTCD2Q8WV60 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.65■□□□□ 0.58
PTCD2Q8WV60 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
PTCD2Q8WV60 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.65■□□□□ 0.58
PTCD2Q8WV60 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTCD2Q8WV60 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.65■□□□□ 0.58
PTCD2Q8WV60 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.65■□□□□ 0.58
PTCD2Q8WV60 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PTCD2Q8WV60 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTCD2Q8WV60 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTCD2Q8WV60 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTCD2Q8WV60 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTCD2Q8WV60 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTCD2Q8WV60 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTCD2Q8WV60 KRT8P7-201ENST00000533003 1432 ntBASIC18.65■□□□□ 0.58
PTCD2Q8WV60 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.65■□□□□ 0.58
PTCD2Q8WV60 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
PTCD2Q8WV60 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PTCD2Q8WV60 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTCD2Q8WV60 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTCD2Q8WV60 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.64■□□□□ 0.57
PTCD2Q8WV60 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTCD2Q8WV60 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTCD2Q8WV60 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTCD2Q8WV60 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms