Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
U2AF1L4Q8WU68 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC21.06■□□□□ 0.96
U2AF1L4Q8WU68 LINC02084-201ENST00000606069 1096 ntBASIC21.06■□□□□ 0.96
U2AF1L4Q8WU68 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
U2AF1L4Q8WU68 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
U2AF1L4Q8WU68 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
U2AF1L4Q8WU68 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
U2AF1L4Q8WU68 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
U2AF1L4Q8WU68 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
U2AF1L4Q8WU68 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
U2AF1L4Q8WU68 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
U2AF1L4Q8WU68 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.05■□□□□ 0.96
U2AF1L4Q8WU68 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
U2AF1L4Q8WU68 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
U2AF1L4Q8WU68 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.05■□□□□ 0.96
U2AF1L4Q8WU68 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
U2AF1L4Q8WU68 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
U2AF1L4Q8WU68 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.05■□□□□ 0.96
U2AF1L4Q8WU68 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.05■□□□□ 0.96
U2AF1L4Q8WU68 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
U2AF1L4Q8WU68 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
U2AF1L4Q8WU68 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
U2AF1L4Q8WU68 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
U2AF1L4Q8WU68 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC21.05■□□□□ 0.96
U2AF1L4Q8WU68 MED22-202ENST00000371999 987 ntTSL 3 BASIC21.05■□□□□ 0.96
U2AF1L4Q8WU68 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
U2AF1L4Q8WU68 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
U2AF1L4Q8WU68 KRT18P67-201ENST00000432816 1264 ntBASIC21.05■□□□□ 0.96
U2AF1L4Q8WU68 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.05■□□□□ 0.96
U2AF1L4Q8WU68 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.05■□□□□ 0.96
U2AF1L4Q8WU68 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.05■□□□□ 0.96
U2AF1L4Q8WU68 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.05■□□□□ 0.96
U2AF1L4Q8WU68 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.05■□□□□ 0.96
U2AF1L4Q8WU68 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.05■□□□□ 0.96
U2AF1L4Q8WU68 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
U2AF1L4Q8WU68 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
U2AF1L4Q8WU68 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
U2AF1L4Q8WU68 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
U2AF1L4Q8WU68 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
U2AF1L4Q8WU68 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
U2AF1L4Q8WU68 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
U2AF1L4Q8WU68 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
U2AF1L4Q8WU68 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
U2AF1L4Q8WU68 NSUN5P1-202ENST00000421140 1535 ntBASIC21.04■□□□□ 0.96
U2AF1L4Q8WU68 NSUN5P2-203ENST00000457352 1529 ntBASIC21.04■□□□□ 0.96
U2AF1L4Q8WU68 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.04■□□□□ 0.96
U2AF1L4Q8WU68 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
U2AF1L4Q8WU68 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
U2AF1L4Q8WU68 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
U2AF1L4Q8WU68 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
U2AF1L4Q8WU68 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
U2AF1L4Q8WU68 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
U2AF1L4Q8WU68 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
U2AF1L4Q8WU68 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
U2AF1L4Q8WU68 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.04■□□□□ 0.96
U2AF1L4Q8WU68 AC005104.2-201ENST00000427818 678 ntBASIC21.04■□□□□ 0.96
U2AF1L4Q8WU68 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC21.04■□□□□ 0.96
U2AF1L4Q8WU68 AC093909.1-201ENST00000504731 1122 ntBASIC21.04■□□□□ 0.96
U2AF1L4Q8WU68 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC21.04■□□□□ 0.96
U2AF1L4Q8WU68 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.04■□□□□ 0.96
U2AF1L4Q8WU68 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
U2AF1L4Q8WU68 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
U2AF1L4Q8WU68 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
U2AF1L4Q8WU68 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
U2AF1L4Q8WU68 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
U2AF1L4Q8WU68 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
U2AF1L4Q8WU68 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
U2AF1L4Q8WU68 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.03■□□□□ 0.96
U2AF1L4Q8WU68 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
U2AF1L4Q8WU68 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
U2AF1L4Q8WU68 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
U2AF1L4Q8WU68 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
U2AF1L4Q8WU68 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
U2AF1L4Q8WU68 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.03■□□□□ 0.96
U2AF1L4Q8WU68 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.03■□□□□ 0.96
U2AF1L4Q8WU68 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
U2AF1L4Q8WU68 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
U2AF1L4Q8WU68 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
U2AF1L4Q8WU68 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
U2AF1L4Q8WU68 MIR940-201ENST00000401276 94 ntBASIC21.03■□□□□ 0.96
U2AF1L4Q8WU68 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC21.03■□□□□ 0.96
U2AF1L4Q8WU68 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC21.03■□□□□ 0.96
U2AF1L4Q8WU68 AF186996.4-201ENST00000467186 377 ntBASIC21.03■□□□□ 0.96
U2AF1L4Q8WU68 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC21.03■□□□□ 0.96
U2AF1L4Q8WU68 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.03■□□□□ 0.96
U2AF1L4Q8WU68 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.03■□□□□ 0.96
U2AF1L4Q8WU68 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
U2AF1L4Q8WU68 AC148477.8-201ENST00000624298 468 ntBASIC21.03■□□□□ 0.96
U2AF1L4Q8WU68 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.03■□□□□ 0.96
U2AF1L4Q8WU68 AP000974.1-201ENST00000623909 2387 ntBASIC21.03■□□□□ 0.96
U2AF1L4Q8WU68 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
U2AF1L4Q8WU68 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
U2AF1L4Q8WU68 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.03■□□□□ 0.96
U2AF1L4Q8WU68 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.03■□□□□ 0.96
U2AF1L4Q8WU68 BX323043.1-201ENST00000641006 1765 ntBASIC21.02■□□□□ 0.96
U2AF1L4Q8WU68 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
U2AF1L4Q8WU68 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
U2AF1L4Q8WU68 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.02■□□□□ 0.96
U2AF1L4Q8WU68 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.02■□□□□ 0.96
U2AF1L4Q8WU68 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms