Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC22.4■■□□□ 1.18
SNED1Q8TER0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
SNED1Q8TER0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SNED1Q8TER0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SNED1Q8TER0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SNED1Q8TER0 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC22.4■■□□□ 1.18
SNED1Q8TER0 HMGN1P19-201ENST00000436976 333 ntBASIC22.4■■□□□ 1.18
SNED1Q8TER0 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC22.4■■□□□ 1.18
SNED1Q8TER0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC22.4■■□□□ 1.18
SNED1Q8TER0 AC012640.2-201ENST00000561606 901 ntBASIC22.4■■□□□ 1.18
SNED1Q8TER0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC22.4■■□□□ 1.18
SNED1Q8TER0 AC140113.2-201ENST00000604370 208 ntBASIC22.4■■□□□ 1.18
SNED1Q8TER0 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC22.4■■□□□ 1.18
SNED1Q8TER0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
SNED1Q8TER0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC22.39■■□□□ 1.18
SNED1Q8TER0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC22.39■■□□□ 1.18
SNED1Q8TER0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SNED1Q8TER0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SNED1Q8TER0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.17
SNED1Q8TER0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
SNED1Q8TER0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SNED1Q8TER0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SNED1Q8TER0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SNED1Q8TER0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
SNED1Q8TER0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC22.39■■□□□ 1.17
SNED1Q8TER0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC22.39■■□□□ 1.17
SNED1Q8TER0 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC22.39■■□□□ 1.17
SNED1Q8TER0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SNED1Q8TER0 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC22.39■■□□□ 1.17
SNED1Q8TER0 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC22.39■■□□□ 1.17
SNED1Q8TER0 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC22.39■■□□□ 1.17
SNED1Q8TER0 MTDHP3-201ENST00000594186 672 ntBASIC22.39■■□□□ 1.17
SNED1Q8TER0 AC011467.2-201ENST00000598425 242 ntBASIC22.39■■□□□ 1.17
SNED1Q8TER0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SNED1Q8TER0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC22.39■■□□□ 1.17
SNED1Q8TER0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC22.39■■□□□ 1.17
SNED1Q8TER0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC22.38■■□□□ 1.17
SNED1Q8TER0 ZNF259P1-201ENST00000407656 1365 ntBASIC22.38■■□□□ 1.17
SNED1Q8TER0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SNED1Q8TER0 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SNED1Q8TER0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC22.38■■□□□ 1.17
SNED1Q8TER0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC22.38■■□□□ 1.17
SNED1Q8TER0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC22.38■■□□□ 1.17
SNED1Q8TER0 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC22.38■■□□□ 1.17
SNED1Q8TER0 NMU-202ENST00000505262 693 ntTSL 3 BASIC22.38■■□□□ 1.17
SNED1Q8TER0 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC22.38■■□□□ 1.17
SNED1Q8TER0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SNED1Q8TER0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
SNED1Q8TER0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SNED1Q8TER0 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SNED1Q8TER0 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SNED1Q8TER0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
SNED1Q8TER0 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SNED1Q8TER0 AC068472.1-201ENST00000474589 881 ntBASIC22.37■■□□□ 1.17
SNED1Q8TER0 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC22.37■■□□□ 1.17
SNED1Q8TER0 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC22.37■■□□□ 1.17
SNED1Q8TER0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC22.37■■□□□ 1.17
SNED1Q8TER0 AC025062.2-201ENST00000605477 670 ntBASIC22.37■■□□□ 1.17
SNED1Q8TER0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SNED1Q8TER0 AC104109.2-201ENST00000602919 1418 ntBASIC22.37■■□□□ 1.17
SNED1Q8TER0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SNED1Q8TER0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SNED1Q8TER0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC22.37■■□□□ 1.17
SNED1Q8TER0 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
SNED1Q8TER0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SNED1Q8TER0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
SNED1Q8TER0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SNED1Q8TER0 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
SNED1Q8TER0 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SNED1Q8TER0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SNED1Q8TER0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
SNED1Q8TER0 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC22.36■■□□□ 1.17
SNED1Q8TER0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC22.36■■□□□ 1.17
SNED1Q8TER0 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC22.36■■□□□ 1.17
SNED1Q8TER0 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC22.36■■□□□ 1.17
SNED1Q8TER0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
SNED1Q8TER0 FAM197Y3-203ENST00000618346 717 ntBASIC22.36■■□□□ 1.17
SNED1Q8TER0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
SNED1Q8TER0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SNED1Q8TER0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SNED1Q8TER0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.35■■□□□ 1.17
SNED1Q8TER0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
SNED1Q8TER0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SNED1Q8TER0 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
SNED1Q8TER0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SNED1Q8TER0 AL024508.2-201ENST00000607749 1894 ntBASIC22.35■■□□□ 1.17
SNED1Q8TER0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC22.35■■□□□ 1.17
SNED1Q8TER0 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SNED1Q8TER0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SNED1Q8TER0 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SNED1Q8TER0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
SNED1Q8TER0 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SNED1Q8TER0 MIR149-201ENST00000384879 89 ntBASIC22.35■■□□□ 1.17
SNED1Q8TER0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SNED1Q8TER0 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC22.35■■□□□ 1.17
SNED1Q8TER0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC22.35■■□□□ 1.17
SNED1Q8TER0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.35■■□□□ 1.17
SNED1Q8TER0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC22.35■■□□□ 1.17
SNED1Q8TER0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SNED1Q8TER0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms