Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 SLC25A24-204ENST00000569674 2357 ntBASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 ABCD1P5-201ENST00000445663 754 ntBASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC12.38□□□□□ -0.43
ALMS1Q8TCU4 TCF3P1-201ENST00000423021 1937 ntBASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 AC244107.1-201ENST00000442033 332 ntBASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 PDPK2P-202ENST00000562415 1191 ntBASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 AL163051.1-201ENST00000569214 1512 ntBASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
ALMS1Q8TCU4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 AC068472.1-201ENST00000474589 881 ntBASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC12.36□□□□□ -0.43
ALMS1Q8TCU4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms