Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.31■□□□□ 0.36
PIK3C3Q8NEB9 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.31■□□□□ 0.36
PIK3C3Q8NEB9 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.31■□□□□ 0.36
PIK3C3Q8NEB9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PIK3C3Q8NEB9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.31■□□□□ 0.36
PIK3C3Q8NEB9 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PIK3C3Q8NEB9 AC135776.1-201ENST00000319817 2481 ntBASIC17.31■□□□□ 0.36
PIK3C3Q8NEB9 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PIK3C3Q8NEB9 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PIK3C3Q8NEB9 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PIK3C3Q8NEB9 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.31■□□□□ 0.36
PIK3C3Q8NEB9 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.31■□□□□ 0.36
PIK3C3Q8NEB9 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.31■□□□□ 0.36
PIK3C3Q8NEB9 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PIK3C3Q8NEB9 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PIK3C3Q8NEB9 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PIK3C3Q8NEB9 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PIK3C3Q8NEB9 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PIK3C3Q8NEB9 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 SLC25A6P5-201ENST00000435663 894 ntBASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.3■□□□□ 0.36
PIK3C3Q8NEB9 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 AC133681.1-201ENST00000465482 601 ntBASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 Z85996.1-201ENST00000494644 937 ntBASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 C1QBPP2-201ENST00000528754 825 ntBASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 AC124016.1-201ENST00000609552 612 ntBASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 AC068587.9-201ENST00000641814 219 ntBASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 MTMR9LP-203ENST00000426597 1545 ntBASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PIK3C3Q8NEB9 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PIK3C3Q8NEB9 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.28■□□□□ 0.36
PIK3C3Q8NEB9 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.28■□□□□ 0.36
PIK3C3Q8NEB9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PIK3C3Q8NEB9 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms