Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 AP001005.1-201ENST00000571755 1248 ntBASIC17.62■□□□□ 0.41
ZNF248Q8NDW4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.62■□□□□ 0.41
ZNF248Q8NDW4 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.62■□□□□ 0.41
ZNF248Q8NDW4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
ZNF248Q8NDW4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF248Q8NDW4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF248Q8NDW4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.62■□□□□ 0.41
ZNF248Q8NDW4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF248Q8NDW4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ZNF248Q8NDW4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF248Q8NDW4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF248Q8NDW4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF248Q8NDW4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF248Q8NDW4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.62■□□□□ 0.41
ZNF248Q8NDW4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 MIR574-201ENST00000385209 96 ntBASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 TSPY12P-201ENST00000421279 868 ntBASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 AP003733.1-201ENST00000491725 852 ntBASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 AC005332.3-201ENST00000589904 676 ntBASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
ZNF248Q8NDW4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.6■□□□□ 0.41
ZNF248Q8NDW4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF248Q8NDW4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF248Q8NDW4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
ZNF248Q8NDW4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms