Protein–RNA interactions for Protein: Q8NBN7

RDH13, Retinol dehydrogenase 13, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13Q8NBN7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.19■□□□□ 0.82
RDH13Q8NBN7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 KRT18P41-201ENST00000518924 1277 ntBASIC20.19■□□□□ 0.82
RDH13Q8NBN7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 HTR7P1-202ENST00000624664 4411 ntBASIC20.19■□□□□ 0.82
RDH13Q8NBN7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RDH13Q8NBN7 AC073508.3-201ENST00000619697 1419 ntBASIC20.19■□□□□ 0.82
RDH13Q8NBN7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.18■□□□□ 0.82
RDH13Q8NBN7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.18■□□□□ 0.82
RDH13Q8NBN7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RDH13Q8NBN7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RDH13Q8NBN7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
RDH13Q8NBN7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.18■□□□□ 0.82
RDH13Q8NBN7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.18■□□□□ 0.82
RDH13Q8NBN7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RDH13Q8NBN7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
RDH13Q8NBN7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RDH13Q8NBN7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
RDH13Q8NBN7 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.18■□□□□ 0.82
RDH13Q8NBN7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RDH13Q8NBN7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RDH13Q8NBN7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.18■□□□□ 0.82
RDH13Q8NBN7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.18■□□□□ 0.82
RDH13Q8NBN7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RDH13Q8NBN7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.18■□□□□ 0.82
RDH13Q8NBN7 AL023973.1-201ENST00000624619 620 ntBASIC20.18■□□□□ 0.82
RDH13Q8NBN7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RDH13Q8NBN7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RDH13Q8NBN7 AC073592.3-201ENST00000625118 1834 ntBASIC20.18■□□□□ 0.82
RDH13Q8NBN7 HOXB1-202ENST00000577092 1414 ntBASIC20.18■□□□□ 0.82
RDH13Q8NBN7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RDH13Q8NBN7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RDH13Q8NBN7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RDH13Q8NBN7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RDH13Q8NBN7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.17■□□□□ 0.82
RDH13Q8NBN7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RDH13Q8NBN7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.17■□□□□ 0.82
RDH13Q8NBN7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RDH13Q8NBN7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RDH13Q8NBN7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RDH13Q8NBN7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RDH13Q8NBN7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RDH13Q8NBN7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.17■□□□□ 0.82
RDH13Q8NBN7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RDH13Q8NBN7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.17■□□□□ 0.82
RDH13Q8NBN7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RDH13Q8NBN7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RDH13Q8NBN7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.17■□□□□ 0.82
RDH13Q8NBN7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RDH13Q8NBN7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RDH13Q8NBN7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RDH13Q8NBN7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.17■□□□□ 0.82
RDH13Q8NBN7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RDH13Q8NBN7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.17■□□□□ 0.82
RDH13Q8NBN7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.17■□□□□ 0.82
RDH13Q8NBN7 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.17■□□□□ 0.82
RDH13Q8NBN7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.17■□□□□ 0.82
RDH13Q8NBN7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RDH13Q8NBN7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RDH13Q8NBN7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RDH13Q8NBN7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.17■□□□□ 0.82
RDH13Q8NBN7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RDH13Q8NBN7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RDH13Q8NBN7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RDH13Q8NBN7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.17■□□□□ 0.82
RDH13Q8NBN7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms