Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 AP000593.1-201ENST00000393668 712 ntBASIC18.83■□□□□ 0.6
KDM1BQ8NB78 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KDM1BQ8NB78 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.83■□□□□ 0.6
KDM1BQ8NB78 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.83■□□□□ 0.6
KDM1BQ8NB78 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.83■□□□□ 0.6
KDM1BQ8NB78 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KDM1BQ8NB78 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KDM1BQ8NB78 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
KDM1BQ8NB78 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KDM1BQ8NB78 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KDM1BQ8NB78 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KDM1BQ8NB78 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
KDM1BQ8NB78 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KDM1BQ8NB78 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.83■□□□□ 0.6
KDM1BQ8NB78 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KDM1BQ8NB78 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.83■□□□□ 0.6
KDM1BQ8NB78 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
KDM1BQ8NB78 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KDM1BQ8NB78 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KDM1BQ8NB78 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.83■□□□□ 0.6
KDM1BQ8NB78 AC007613.1-201ENST00000572811 2597 ntBASIC18.83■□□□□ 0.6
KDM1BQ8NB78 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.82■□□□□ 0.6
KDM1BQ8NB78 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KDM1BQ8NB78 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.82■□□□□ 0.6
KDM1BQ8NB78 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
KDM1BQ8NB78 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
KDM1BQ8NB78 AC093525.10-201ENST00000625130 1569 ntBASIC18.82■□□□□ 0.6
KDM1BQ8NB78 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
KDM1BQ8NB78 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
KDM1BQ8NB78 ATP5G2P1-201ENST00000433580 426 ntBASIC18.82■□□□□ 0.6
KDM1BQ8NB78 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
KDM1BQ8NB78 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.82■□□□□ 0.6
KDM1BQ8NB78 AC011498.5-201ENST00000592027 486 ntBASIC18.82■□□□□ 0.6
KDM1BQ8NB78 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.82■□□□□ 0.6
KDM1BQ8NB78 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KDM1BQ8NB78 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
KDM1BQ8NB78 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.82■□□□□ 0.6
KDM1BQ8NB78 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
KDM1BQ8NB78 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KDM1BQ8NB78 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KDM1BQ8NB78 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KDM1BQ8NB78 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.82■□□□□ 0.6
KDM1BQ8NB78 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
KDM1BQ8NB78 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
KDM1BQ8NB78 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.82■□□□□ 0.6
KDM1BQ8NB78 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
KDM1BQ8NB78 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KDM1BQ8NB78 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KDM1BQ8NB78 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KDM1BQ8NB78 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.81■□□□□ 0.6
KDM1BQ8NB78 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KDM1BQ8NB78 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
KDM1BQ8NB78 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.81■□□□□ 0.6
KDM1BQ8NB78 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
KDM1BQ8NB78 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.81■□□□□ 0.6
KDM1BQ8NB78 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.81■□□□□ 0.6
KDM1BQ8NB78 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.81■□□□□ 0.6
KDM1BQ8NB78 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.81■□□□□ 0.6
KDM1BQ8NB78 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.81■□□□□ 0.6
KDM1BQ8NB78 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
KDM1BQ8NB78 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.81■□□□□ 0.6
KDM1BQ8NB78 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
KDM1BQ8NB78 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KDM1BQ8NB78 AL357033.4-201ENST00000617703 1807 ntBASIC18.81■□□□□ 0.6
KDM1BQ8NB78 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KDM1BQ8NB78 AL162741.1-201ENST00000565563 1558 ntBASIC18.81■□□□□ 0.6
KDM1BQ8NB78 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.8■□□□□ 0.6
KDM1BQ8NB78 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KDM1BQ8NB78 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.8■□□□□ 0.6
KDM1BQ8NB78 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KDM1BQ8NB78 MTMR9LP-203ENST00000426597 1545 ntBASIC18.8■□□□□ 0.6
KDM1BQ8NB78 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.8■□□□□ 0.6
KDM1BQ8NB78 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KDM1BQ8NB78 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KDM1BQ8NB78 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.8■□□□□ 0.6
KDM1BQ8NB78 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.8■□□□□ 0.6
KDM1BQ8NB78 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
KDM1BQ8NB78 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
KDM1BQ8NB78 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KDM1BQ8NB78 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KDM1BQ8NB78 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.8■□□□□ 0.6
KDM1BQ8NB78 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KDM1BQ8NB78 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
KDM1BQ8NB78 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.8■□□□□ 0.6
KDM1BQ8NB78 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.8■□□□□ 0.6
KDM1BQ8NB78 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.8■□□□□ 0.6
KDM1BQ8NB78 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.8■□□□□ 0.6
KDM1BQ8NB78 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.8■□□□□ 0.6
KDM1BQ8NB78 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.8■□□□□ 0.6
KDM1BQ8NB78 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.8■□□□□ 0.6
KDM1BQ8NB78 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.8■□□□□ 0.6
KDM1BQ8NB78 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KDM1BQ8NB78 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KDM1BQ8NB78 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KDM1BQ8NB78 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KDM1BQ8NB78 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
KDM1BQ8NB78 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
KDM1BQ8NB78 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.79■□□□□ 0.6
KDM1BQ8NB78 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.79■□□□□ 0.6
KDM1BQ8NB78 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms