Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 AL136038.3-201ENST00000561909 1096 ntBASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.71■□□□□ 0.43
LINC01555Q8NAE3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01555Q8NAE3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.71■□□□□ 0.43
LINC01555Q8NAE3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LINC01555Q8NAE3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01555Q8NAE3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LINC01555Q8NAE3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01555Q8NAE3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01555Q8NAE3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01555Q8NAE3 MIR662-201ENST00000384847 95 ntBASIC17.71■□□□□ 0.43
LINC01555Q8NAE3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01555Q8NAE3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.71■□□□□ 0.43
LINC01555Q8NAE3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.71■□□□□ 0.43
LINC01555Q8NAE3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.71■□□□□ 0.43
LINC01555Q8NAE3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.71■□□□□ 0.43
LINC01555Q8NAE3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.71■□□□□ 0.43
LINC01555Q8NAE3 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.71■□□□□ 0.43
LINC01555Q8NAE3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.71■□□□□ 0.43
LINC01555Q8NAE3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.71■□□□□ 0.43
LINC01555Q8NAE3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01555Q8NAE3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01555Q8NAE3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.71■□□□□ 0.43
LINC01555Q8NAE3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01555Q8NAE3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01555Q8NAE3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01555Q8NAE3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LINC01555Q8NAE3 AC005332.1-201ENST00000577698 1310 ntBASIC17.71■□□□□ 0.42
LINC01555Q8NAE3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.42
LINC01555Q8NAE3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 LINC01126-201ENST00000623515 1646 ntBASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC01555Q8NAE3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01555Q8NAE3 AC090164.3-201ENST00000610780 2143 ntBASIC17.69■□□□□ 0.42
LINC01555Q8NAE3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
LINC01555Q8NAE3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01555Q8NAE3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01555Q8NAE3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.69■□□□□ 0.42
LINC01555Q8NAE3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms