Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC89Q8N998 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC89Q8N998 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC89Q8N998 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC89Q8N998 AC011506.1-201ENST00000474329 610 ntBASIC19.16■□□□□ 0.66
CCDC89Q8N998 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC89Q8N998 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC89Q8N998 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC89Q8N998 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CCDC89Q8N998 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC89Q8N998 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CCDC89Q8N998 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC89Q8N998 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC89Q8N998 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC89Q8N998 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC89Q8N998 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC89Q8N998 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC89Q8N998 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC89Q8N998 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CCDC89Q8N998 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC89Q8N998 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC89Q8N998 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC89Q8N998 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC89Q8N998 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC89Q8N998 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC89Q8N998 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CCDC89Q8N998 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC89Q8N998 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC89Q8N998 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CCDC89Q8N998 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CCDC89Q8N998 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC89Q8N998 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC89Q8N998 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC89Q8N998 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC89Q8N998 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CCDC89Q8N998 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CCDC89Q8N998 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
CCDC89Q8N998 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CCDC89Q8N998 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC89Q8N998 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC89Q8N998 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CCDC89Q8N998 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC89Q8N998 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC89Q8N998 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC89Q8N998 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC89Q8N998 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC89Q8N998 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC89Q8N998 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC89Q8N998 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CCDC89Q8N998 AC008556.1-201ENST00000610908 2040 ntBASIC19.15■□□□□ 0.66
CCDC89Q8N998 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
CCDC89Q8N998 FSCN1P1-201ENST00000568912 1481 ntBASIC19.15■□□□□ 0.66
CCDC89Q8N998 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC89Q8N998 MYLKP1-201ENST00000509077 1580 ntBASIC19.15■□□□□ 0.66
CCDC89Q8N998 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
CCDC89Q8N998 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
CCDC89Q8N998 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC89Q8N998 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CCDC89Q8N998 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC89Q8N998 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC89Q8N998 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
CCDC89Q8N998 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC89Q8N998 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC89Q8N998 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC89Q8N998 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC89Q8N998 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC89Q8N998 SLC25A6P5-201ENST00000435663 894 ntBASIC19.14■□□□□ 0.65
CCDC89Q8N998 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.14■□□□□ 0.65
CCDC89Q8N998 FAM201B-201ENST00000458407 597 ntBASIC19.14■□□□□ 0.65
CCDC89Q8N998 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC89Q8N998 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.14■□□□□ 0.65
CCDC89Q8N998 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC89Q8N998 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CCDC89Q8N998 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC89Q8N998 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC89Q8N998 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CCDC89Q8N998 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC89Q8N998 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC89Q8N998 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC89Q8N998 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC89Q8N998 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC89Q8N998 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC89Q8N998 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC89Q8N998 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.14■□□□□ 0.65
CCDC89Q8N998 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CCDC89Q8N998 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC89Q8N998 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC89Q8N998 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC89Q8N998 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC89Q8N998 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC89Q8N998 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
CCDC89Q8N998 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC89Q8N998 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC89Q8N998 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.13■□□□□ 0.65
CCDC89Q8N998 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC89Q8N998 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC89Q8N998 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC89Q8N998 AL359736.2-201ENST00000621992 437 ntBASIC19.13■□□□□ 0.65
CCDC89Q8N998 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC89Q8N998 AL135905.2-201ENST00000584934 1404 ntBASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms