Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC39CQ8N584 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC39CQ8N584 AC005082.1-201ENST00000413042 2259 ntBASIC19.59■□□□□ 0.73
TTC39CQ8N584 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TTC39CQ8N584 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.59■□□□□ 0.73
TTC39CQ8N584 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TTC39CQ8N584 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC39CQ8N584 HCG11-201ENST00000411553 5696 ntBASIC19.59■□□□□ 0.73
TTC39CQ8N584 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TTC39CQ8N584 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC39CQ8N584 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.59■□□□□ 0.73
TTC39CQ8N584 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC39CQ8N584 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TTC39CQ8N584 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.58■□□□□ 0.73
TTC39CQ8N584 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TTC39CQ8N584 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
TTC39CQ8N584 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
TTC39CQ8N584 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TTC39CQ8N584 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.58■□□□□ 0.73
TTC39CQ8N584 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TTC39CQ8N584 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TTC39CQ8N584 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.58■□□□□ 0.73
TTC39CQ8N584 SPDYE15P-201ENST00000424157 909 ntBASIC19.58■□□□□ 0.72
TTC39CQ8N584 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TTC39CQ8N584 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.58■□□□□ 0.72
TTC39CQ8N584 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.58■□□□□ 0.72
TTC39CQ8N584 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.58■□□□□ 0.72
TTC39CQ8N584 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TTC39CQ8N584 AL590326.2-201ENST00000625139 305 ntBASIC19.58■□□□□ 0.72
TTC39CQ8N584 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TTC39CQ8N584 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.58■□□□□ 0.72
TTC39CQ8N584 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.58■□□□□ 0.72
TTC39CQ8N584 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
TTC39CQ8N584 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.58■□□□□ 0.72
TTC39CQ8N584 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
TTC39CQ8N584 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TTC39CQ8N584 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TTC39CQ8N584 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TTC39CQ8N584 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TTC39CQ8N584 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TTC39CQ8N584 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TTC39CQ8N584 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TTC39CQ8N584 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TTC39CQ8N584 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TTC39CQ8N584 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TTC39CQ8N584 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TTC39CQ8N584 KRT89P-201ENST00000620027 1478 ntBASIC19.57■□□□□ 0.72
TTC39CQ8N584 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TTC39CQ8N584 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TTC39CQ8N584 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TTC39CQ8N584 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.57■□□□□ 0.72
TTC39CQ8N584 AL136038.4-201ENST00000603606 1261 ntBASIC19.57■□□□□ 0.72
TTC39CQ8N584 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.57■□□□□ 0.72
TTC39CQ8N584 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TTC39CQ8N584 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.57■□□□□ 0.72
TTC39CQ8N584 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TTC39CQ8N584 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
TTC39CQ8N584 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TTC39CQ8N584 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TTC39CQ8N584 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TTC39CQ8N584 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.57■□□□□ 0.72
TTC39CQ8N584 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TTC39CQ8N584 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TTC39CQ8N584 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.56■□□□□ 0.72
TTC39CQ8N584 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.56■□□□□ 0.72
TTC39CQ8N584 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TTC39CQ8N584 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TTC39CQ8N584 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TTC39CQ8N584 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.56■□□□□ 0.72
TTC39CQ8N584 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.56■□□□□ 0.72
TTC39CQ8N584 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TTC39CQ8N584 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TTC39CQ8N584 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TTC39CQ8N584 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TTC39CQ8N584 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
TTC39CQ8N584 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.56■□□□□ 0.72
TTC39CQ8N584 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TTC39CQ8N584 HLA-F-220ENST00000434407 884 ntBASIC19.56■□□□□ 0.72
TTC39CQ8N584 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TTC39CQ8N584 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.56■□□□□ 0.72
TTC39CQ8N584 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TTC39CQ8N584 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TTC39CQ8N584 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.56■□□□□ 0.72
TTC39CQ8N584 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TTC39CQ8N584 AL391807.1-203ENST00000604392 2365 ntBASIC19.56■□□□□ 0.72
TTC39CQ8N584 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TTC39CQ8N584 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TTC39CQ8N584 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TTC39CQ8N584 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TTC39CQ8N584 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TTC39CQ8N584 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
TTC39CQ8N584 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.55■□□□□ 0.72
TTC39CQ8N584 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TTC39CQ8N584 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.55■□□□□ 0.72
TTC39CQ8N584 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.55■□□□□ 0.72
TTC39CQ8N584 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TTC39CQ8N584 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.55■□□□□ 0.72
TTC39CQ8N584 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.55■□□□□ 0.72
TTC39CQ8N584 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TTC39CQ8N584 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms