Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC116Q8IYX3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 FAM87A-204ENST00000613235 858 ntBASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 KRT18P22-201ENST00000402024 1347 ntBASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC116Q8IYX3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 HMGA1P5-201ENST00000412453 271 ntBASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC116Q8IYX3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC116Q8IYX3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC116Q8IYX3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC116Q8IYX3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC116Q8IYX3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC116Q8IYX3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC116Q8IYX3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC116Q8IYX3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC116Q8IYX3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC116Q8IYX3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC116Q8IYX3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC116Q8IYX3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC116Q8IYX3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC116Q8IYX3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.37■□□□□ 0.37
CCDC116Q8IYX3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC116Q8IYX3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC116Q8IYX3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC116Q8IYX3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CCDC116Q8IYX3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC116Q8IYX3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CCDC116Q8IYX3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC116Q8IYX3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC116Q8IYX3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CCDC116Q8IYX3 KRT8P7-201ENST00000533003 1432 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms