Protein–RNA interactions for Protein: Q8IYA2

CCDC144CP, Putative coiled-coil domain-containing protein 144C, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CPQ8IYA2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC144CPQ8IYA2 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC144CPQ8IYA2 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144CPQ8IYA2 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144CPQ8IYA2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CCDC144CPQ8IYA2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144CPQ8IYA2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144CPQ8IYA2 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144CPQ8IYA2 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144CPQ8IYA2 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144CPQ8IYA2 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144CPQ8IYA2 HOMER2P1-201ENST00000455653 964 ntBASIC21.77■■□□□ 1.08
CCDC144CPQ8IYA2 AL359075.1-203ENST00000462729 1002 ntBASIC21.77■■□□□ 1.08
CCDC144CPQ8IYA2 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CCDC144CPQ8IYA2 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.77■■□□□ 1.08
CCDC144CPQ8IYA2 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.77■■□□□ 1.08
CCDC144CPQ8IYA2 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144CPQ8IYA2 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
CCDC144CPQ8IYA2 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.77■■□□□ 1.08
CCDC144CPQ8IYA2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144CPQ8IYA2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144CPQ8IYA2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144CPQ8IYA2 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC144CPQ8IYA2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC144CPQ8IYA2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144CPQ8IYA2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144CPQ8IYA2 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
CCDC144CPQ8IYA2 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.77■■□□□ 1.07
CCDC144CPQ8IYA2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CCDC144CPQ8IYA2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144CPQ8IYA2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
CCDC144CPQ8IYA2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144CPQ8IYA2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144CPQ8IYA2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144CPQ8IYA2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CCDC144CPQ8IYA2 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.76■■□□□ 1.07
CCDC144CPQ8IYA2 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC144CPQ8IYA2 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC144CPQ8IYA2 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.76■■□□□ 1.07
CCDC144CPQ8IYA2 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC144CPQ8IYA2 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144CPQ8IYA2 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC144CPQ8IYA2 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
CCDC144CPQ8IYA2 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.76■■□□□ 1.07
CCDC144CPQ8IYA2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144CPQ8IYA2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.76■■□□□ 1.07
CCDC144CPQ8IYA2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144CPQ8IYA2 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144CPQ8IYA2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC144CPQ8IYA2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144CPQ8IYA2 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC144CPQ8IYA2 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CCDC144CPQ8IYA2 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144CPQ8IYA2 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144CPQ8IYA2 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144CPQ8IYA2 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144CPQ8IYA2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144CPQ8IYA2 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144CPQ8IYA2 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC144CPQ8IYA2 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144CPQ8IYA2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 FAM86EP-206ENST00000510506 987 ntBASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 AP000550.4-202ENST00000639755 178 ntBASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 AC009113.1-201ENST00000570267 2443 ntBASIC21.75■■□□□ 1.07
CCDC144CPQ8IYA2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC144CPQ8IYA2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC144CPQ8IYA2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC144CPQ8IYA2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms