Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.41■□□□□ 0.54
TRIM42Q8IWZ5 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIM42Q8IWZ5 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.41■□□□□ 0.54
TRIM42Q8IWZ5 C1QL1P1-201ENST00000568105 661 ntBASIC18.41■□□□□ 0.54
TRIM42Q8IWZ5 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIM42Q8IWZ5 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM42Q8IWZ5 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TRIM42Q8IWZ5 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM42Q8IWZ5 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIM42Q8IWZ5 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM42Q8IWZ5 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM42Q8IWZ5 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM42Q8IWZ5 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM42Q8IWZ5 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TRIM42Q8IWZ5 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM42Q8IWZ5 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 KRT8P3-201ENST00000519669 1449 ntBASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 AL357033.4-201ENST00000617703 1807 ntBASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 TSPY20P-201ENST00000450910 630 ntBASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRIM42Q8IWZ5 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRIM42Q8IWZ5 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TRIM42Q8IWZ5 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRIM42Q8IWZ5 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRIM42Q8IWZ5 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRIM42Q8IWZ5 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRIM42Q8IWZ5 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TRIM42Q8IWZ5 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.39■□□□□ 0.53
TRIM42Q8IWZ5 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM42Q8IWZ5 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM42Q8IWZ5 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TRIM42Q8IWZ5 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM42Q8IWZ5 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM42Q8IWZ5 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM42Q8IWZ5 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM42Q8IWZ5 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM42Q8IWZ5 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM42Q8IWZ5 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM42Q8IWZ5 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.39■□□□□ 0.53
TRIM42Q8IWZ5 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.39■□□□□ 0.53
TRIM42Q8IWZ5 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM42Q8IWZ5 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM42Q8IWZ5 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM42Q8IWZ5 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM42Q8IWZ5 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
TRIM42Q8IWZ5 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM42Q8IWZ5 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM42Q8IWZ5 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM42Q8IWZ5 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.39■□□□□ 0.53
TRIM42Q8IWZ5 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM42Q8IWZ5 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM42Q8IWZ5 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.38■□□□□ 0.53
TRIM42Q8IWZ5 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM42Q8IWZ5 REXO1L9P-201ENST00000604264 2108 ntBASIC18.38■□□□□ 0.53
TRIM42Q8IWZ5 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM42Q8IWZ5 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TRIM42Q8IWZ5 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM42Q8IWZ5 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
TRIM42Q8IWZ5 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM42Q8IWZ5 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM42Q8IWZ5 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM42Q8IWZ5 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
TRIM42Q8IWZ5 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
TRIM42Q8IWZ5 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM42Q8IWZ5 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.38■□□□□ 0.53
TRIM42Q8IWZ5 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM42Q8IWZ5 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM42Q8IWZ5 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms