Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 MIR940-201ENST00000401276 94 ntBASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 AC005104.2-201ENST00000427818 678 ntBASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 AC009065.1-201ENST00000564055 1225 ntBASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 AP005901.3-202ENST00000581653 237 ntBASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 AC079602.3-201ENST00000623931 403 ntBASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 AC007952.6-201ENST00000573168 2673 ntBASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 AC003957.1-201ENST00000625108 2673 ntBASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 IGHGP-201ENST00000390555 1178 ntBASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 BNIP3P18-201ENST00000593976 575 ntBASIC16.68■□□□□ 0.26
RP1L1Q8IWN7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RP1L1Q8IWN7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RP1L1Q8IWN7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RP1L1Q8IWN7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RP1L1Q8IWN7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RP1L1Q8IWN7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.67■□□□□ 0.26
RP1L1Q8IWN7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RP1L1Q8IWN7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RP1L1Q8IWN7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RP1L1Q8IWN7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.67■□□□□ 0.26
RP1L1Q8IWN7 RPL13AP23-201ENST00000480739 586 ntBASIC16.67■□□□□ 0.26
RP1L1Q8IWN7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RP1L1Q8IWN7 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.67■□□□□ 0.26
RP1L1Q8IWN7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.67■□□□□ 0.26
RP1L1Q8IWN7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.67■□□□□ 0.26
RP1L1Q8IWN7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
RP1L1Q8IWN7 AC005332.3-201ENST00000589904 676 ntBASIC16.67■□□□□ 0.26
RP1L1Q8IWN7 AC099336.1-202ENST00000602961 463 ntBASIC16.67■□□□□ 0.26
RP1L1Q8IWN7 AL592071.1-201ENST00000611956 408 ntBASIC16.67■□□□□ 0.26
RP1L1Q8IWN7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.67■□□□□ 0.26
RP1L1Q8IWN7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RP1L1Q8IWN7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RP1L1Q8IWN7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RP1L1Q8IWN7 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RP1L1Q8IWN7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RP1L1Q8IWN7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.67■□□□□ 0.26
RP1L1Q8IWN7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RP1L1Q8IWN7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RP1L1Q8IWN7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RP1L1Q8IWN7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
RP1L1Q8IWN7 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.67■□□□□ 0.26
RP1L1Q8IWN7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RP1L1Q8IWN7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RP1L1Q8IWN7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RP1L1Q8IWN7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.66■□□□□ 0.26
RP1L1Q8IWN7 GABARAPL3-202ENST00000624044 1851 ntBASIC16.66■□□□□ 0.26
RP1L1Q8IWN7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RP1L1Q8IWN7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RP1L1Q8IWN7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RP1L1Q8IWN7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RP1L1Q8IWN7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RP1L1Q8IWN7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RP1L1Q8IWN7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RP1L1Q8IWN7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RP1L1Q8IWN7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.66■□□□□ 0.26
RP1L1Q8IWN7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RP1L1Q8IWN7 AC011840.4-201ENST00000578471 627 ntBASIC16.66■□□□□ 0.26
RP1L1Q8IWN7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.66■□□□□ 0.26
RP1L1Q8IWN7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.66■□□□□ 0.26
RP1L1Q8IWN7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.66■□□□□ 0.26
RP1L1Q8IWN7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.66■□□□□ 0.26
RP1L1Q8IWN7 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.66■□□□□ 0.26
RP1L1Q8IWN7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RP1L1Q8IWN7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.66■□□□□ 0.26
RP1L1Q8IWN7 AL109659.2-201ENST00000606809 1674 ntBASIC16.66■□□□□ 0.26
RP1L1Q8IWN7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RP1L1Q8IWN7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RP1L1Q8IWN7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RP1L1Q8IWN7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
RP1L1Q8IWN7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RP1L1Q8IWN7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.66■□□□□ 0.26
RP1L1Q8IWN7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 AC018712.1-201ENST00000455767 687 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms