Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 NOC2LP1-202ENST00000452600 2235 ntBASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 MIR718-201ENST00000390190 70 ntBASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 TMEM191A-211ENST00000637163 1067 ntBASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00346Q8IVM7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00346Q8IVM7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00346Q8IVM7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00346Q8IVM7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
LINC00346Q8IVM7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00346Q8IVM7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LINC00346Q8IVM7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00346Q8IVM7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00346Q8IVM7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.34■□□□□ 0.21
LINC00346Q8IVM7 MIR564-202ENST00000385049 94 ntBASIC16.34■□□□□ 0.21
LINC00346Q8IVM7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00346Q8IVM7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.34■□□□□ 0.21
LINC00346Q8IVM7 RBM17P1-201ENST00000453646 1190 ntBASIC16.34■□□□□ 0.21
LINC00346Q8IVM7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00346Q8IVM7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.34■□□□□ 0.21
LINC00346Q8IVM7 MIR4674-201ENST00000582457 87 ntBASIC16.34■□□□□ 0.21
LINC00346Q8IVM7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.34■□□□□ 0.21
LINC00346Q8IVM7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
LINC00346Q8IVM7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
LINC00346Q8IVM7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00346Q8IVM7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00346Q8IVM7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00346Q8IVM7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00346Q8IVM7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.34■□□□□ 0.21
LINC00346Q8IVM7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LINC00346Q8IVM7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.34■□□□□ 0.21
LINC00346Q8IVM7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00346Q8IVM7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00346Q8IVM7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00346Q8IVM7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.34■□□□□ 0.21
LINC00346Q8IVM7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00346Q8IVM7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
LINC00346Q8IVM7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LINC00346Q8IVM7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
LINC00346Q8IVM7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LINC00346Q8IVM7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
LINC00346Q8IVM7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.33■□□□□ 0.21
LINC00346Q8IVM7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC00346Q8IVM7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LINC00346Q8IVM7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC00346Q8IVM7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC00346Q8IVM7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC00346Q8IVM7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC00346Q8IVM7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LINC00346Q8IVM7 AL390955.1-201ENST00000428694 934 ntBASIC16.33■□□□□ 0.2
LINC00346Q8IVM7 CA15P1-201ENST00000481698 905 ntBASIC16.33■□□□□ 0.2
LINC00346Q8IVM7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.33■□□□□ 0.2
LINC00346Q8IVM7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.33■□□□□ 0.2
LINC00346Q8IVM7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.33■□□□□ 0.2
LINC00346Q8IVM7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.33■□□□□ 0.2
LINC00346Q8IVM7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.33■□□□□ 0.2
LINC00346Q8IVM7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
LINC00346Q8IVM7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC00346Q8IVM7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.33■□□□□ 0.2
LINC00346Q8IVM7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
LINC00346Q8IVM7 AC036111.1-201ENST00000533973 1582 ntBASIC16.33■□□□□ 0.2
LINC00346Q8IVM7 AL162741.1-201ENST00000565563 1558 ntBASIC16.33■□□□□ 0.2
LINC00346Q8IVM7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.33■□□□□ 0.2
LINC00346Q8IVM7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms