Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPAS4Q8IUM7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPAS4Q8IUM7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.74■□□□□ 0.75
NPAS4Q8IUM7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPAS4Q8IUM7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.74■□□□□ 0.75
NPAS4Q8IUM7 AF186996.4-201ENST00000467186 377 ntBASIC19.74■□□□□ 0.75
NPAS4Q8IUM7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.74■□□□□ 0.75
NPAS4Q8IUM7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.74■□□□□ 0.75
NPAS4Q8IUM7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.74■□□□□ 0.75
NPAS4Q8IUM7 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.74■□□□□ 0.75
NPAS4Q8IUM7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
NPAS4Q8IUM7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPAS4Q8IUM7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPAS4Q8IUM7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NPAS4Q8IUM7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPAS4Q8IUM7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPAS4Q8IUM7 IL9RP2-201ENST00000423948 1312 ntBASIC19.74■□□□□ 0.75
NPAS4Q8IUM7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
NPAS4Q8IUM7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.73■□□□□ 0.75
NPAS4Q8IUM7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPAS4Q8IUM7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPAS4Q8IUM7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.73■□□□□ 0.75
NPAS4Q8IUM7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPAS4Q8IUM7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
NPAS4Q8IUM7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPAS4Q8IUM7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPAS4Q8IUM7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.73■□□□□ 0.75
NPAS4Q8IUM7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
NPAS4Q8IUM7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPAS4Q8IUM7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.73■□□□□ 0.75
NPAS4Q8IUM7 AL031284.1-201ENST00000419297 478 ntBASIC19.73■□□□□ 0.75
NPAS4Q8IUM7 PMS2P1-201ENST00000431037 1228 ntBASIC19.73■□□□□ 0.75
NPAS4Q8IUM7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NPAS4Q8IUM7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.73■□□□□ 0.75
NPAS4Q8IUM7 AC008608.2-201ENST00000606089 416 ntBASIC19.73■□□□□ 0.75
NPAS4Q8IUM7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
NPAS4Q8IUM7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPAS4Q8IUM7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPAS4Q8IUM7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
NPAS4Q8IUM7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.73■□□□□ 0.75
NPAS4Q8IUM7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NPAS4Q8IUM7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPAS4Q8IUM7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPAS4Q8IUM7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPAS4Q8IUM7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NPAS4Q8IUM7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.72■□□□□ 0.75
NPAS4Q8IUM7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPAS4Q8IUM7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPAS4Q8IUM7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPAS4Q8IUM7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NPAS4Q8IUM7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NPAS4Q8IUM7 AC132008.2-207ENST00000454517 770 ntBASIC19.72■□□□□ 0.75
NPAS4Q8IUM7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
NPAS4Q8IUM7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.72■□□□□ 0.75
NPAS4Q8IUM7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.72■□□□□ 0.75
NPAS4Q8IUM7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.72■□□□□ 0.75
NPAS4Q8IUM7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.72■□□□□ 0.75
NPAS4Q8IUM7 AL161938.1-201ENST00000569833 2180 ntBASIC19.72■□□□□ 0.75
NPAS4Q8IUM7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.72■□□□□ 0.75
NPAS4Q8IUM7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NPAS4Q8IUM7 AF228730.7-201ENST00000641842 219 ntBASIC19.72■□□□□ 0.75
NPAS4Q8IUM7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.72■□□□□ 0.75
NPAS4Q8IUM7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
NPAS4Q8IUM7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPAS4Q8IUM7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPAS4Q8IUM7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NPAS4Q8IUM7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPAS4Q8IUM7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.72■□□□□ 0.75
NPAS4Q8IUM7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
NPAS4Q8IUM7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
NPAS4Q8IUM7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
NPAS4Q8IUM7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.71■□□□□ 0.75
NPAS4Q8IUM7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPAS4Q8IUM7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPAS4Q8IUM7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.71■□□□□ 0.75
NPAS4Q8IUM7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPAS4Q8IUM7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NPAS4Q8IUM7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
NPAS4Q8IUM7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.71■□□□□ 0.75
NPAS4Q8IUM7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NPAS4Q8IUM7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NPAS4Q8IUM7 AC005336.2-201ENST00000593183 939 ntBASIC19.71■□□□□ 0.75
NPAS4Q8IUM7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
NPAS4Q8IUM7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NPAS4Q8IUM7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.71■□□□□ 0.75
NPAS4Q8IUM7 AC117500.6-201ENST00000624871 588 ntBASIC19.71■□□□□ 0.75
NPAS4Q8IUM7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
NPAS4Q8IUM7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.71■□□□□ 0.75
NPAS4Q8IUM7 AFG3L1P-217ENST00000557444 2447 ntBASIC19.71■□□□□ 0.75
NPAS4Q8IUM7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.71■□□□□ 0.75
NPAS4Q8IUM7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPAS4Q8IUM7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPAS4Q8IUM7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPAS4Q8IUM7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NPAS4Q8IUM7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPAS4Q8IUM7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NPAS4Q8IUM7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.7■□□□□ 0.74
NPAS4Q8IUM7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
NPAS4Q8IUM7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPAS4Q8IUM7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms