Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
ZNF546Q86UE3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF546Q86UE3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF546Q86UE3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF546Q86UE3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC15.35■□□□□ 0.05
ZNF546Q86UE3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.35■□□□□ 0.05
ZNF546Q86UE3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF546Q86UE3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
ZNF546Q86UE3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC15.35■□□□□ 0.05
ZNF546Q86UE3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC15.35■□□□□ 0.05
ZNF546Q86UE3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC15.35■□□□□ 0.05
ZNF546Q86UE3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF546Q86UE3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF546Q86UE3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.35■□□□□ 0.05
ZNF546Q86UE3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
ZNF546Q86UE3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
ZNF546Q86UE3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF546Q86UE3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
ZNF546Q86UE3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF546Q86UE3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.35■□□□□ 0.05
ZNF546Q86UE3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF546Q86UE3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF546Q86UE3 AL121761.2-201ENST00000598007 1648 ntBASIC15.35■□□□□ 0.05
ZNF546Q86UE3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.35■□□□□ 0.05
ZNF546Q86UE3 AL162727.3-201ENST00000635661 2787 ntBASIC15.35■□□□□ 0.05
ZNF546Q86UE3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
ZNF546Q86UE3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF546Q86UE3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF546Q86UE3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 RARRES2P4-201ENST00000514074 484 ntBASIC15.34■□□□□ 0.05
ZNF546Q86UE3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC15.34■□□□□ 0.05
ZNF546Q86UE3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF546Q86UE3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF546Q86UE3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.33■□□□□ 0.05
ZNF546Q86UE3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF546Q86UE3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF546Q86UE3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF546Q86UE3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
ZNF546Q86UE3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF546Q86UE3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF546Q86UE3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF546Q86UE3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
ZNF546Q86UE3 AL391005.1-201ENST00000623953 2435 ntBASIC15.33■□□□□ 0.04
ZNF546Q86UE3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF546Q86UE3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF546Q86UE3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.33■□□□□ 0.04
ZNF546Q86UE3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF546Q86UE3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.33■□□□□ 0.04
ZNF546Q86UE3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF546Q86UE3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF546Q86UE3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF546Q86UE3 KRT18P68-201ENST00000392293 1000 ntBASIC15.33■□□□□ 0.04
ZNF546Q86UE3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF546Q86UE3 KRT18P11-201ENST00000435214 1283 ntBASIC15.33■□□□□ 0.04
ZNF546Q86UE3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
ZNF546Q86UE3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF546Q86UE3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC15.33■□□□□ 0.04
ZNF546Q86UE3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF546Q86UE3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF546Q86UE3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF546Q86UE3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF546Q86UE3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.33■□□□□ 0.04
ZNF546Q86UE3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF546Q86UE3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF546Q86UE3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms